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    LOC110091020 protein tyrosine phosphatase type IVA 3 [ Pogona vitticeps (central bearded dragon) ]

    Gene ID: 110091020, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC110091020
    Gene description
    protein tyrosine phosphatase type IVA 3
    See related
    Ensembl:ENSPVIG00000015512
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pogona vitticeps
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
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    Genomic context

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    See LOC110091020 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018151648.1 (130618..288317)

    NW_018151648.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018151648.1 Unplaced Scaffold Reference pvi1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine/serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endothelial cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein tyrosine phosphatase type IVA 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pvi1.1

    Genomic

    1. NW_018151648.1 Reference pvi1.1

      Range
      130618..288317
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020814982.1 → XP_020670641.1  protein tyrosine phosphatase type IVA 3 isoform X1

      UniProtKB/TrEMBL
      A0A6J0VIT7
      Related
      ENSPVIP00000020341.1, ENSPVIT00000025276.1
      Conserved Domains (1) summary
      cl21483
      Location:11 → 173
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

    2. XM_020814986.1 → XP_020670645.1  protein tyrosine phosphatase type IVA 3 isoform X2

      UniProtKB/TrEMBL
      A0A6J0VGH8
      Related
      ENSPVIP00000020343.1, ENSPVIT00000025278.1
      Conserved Domains (1) summary
      cl21483
      Location:11 → 173
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

    3. XM_020814983.1 → XP_020670642.1  protein tyrosine phosphatase type IVA 3 isoform X1

      UniProtKB/TrEMBL
      A0A6J0VIT7
      Conserved Domains (1) summary
      cl21483
      Location:11 → 173
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

    4. XM_020814985.1 → XP_020670644.1  protein tyrosine phosphatase type IVA 3 isoform X1

      UniProtKB/TrEMBL
      A0A6J0VIT7
      Conserved Domains (1) summary
      cl21483
      Location:11 → 173
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

    5. XM_020814984.1 → XP_020670643.1  protein tyrosine phosphatase type IVA 3 isoform X1

      UniProtKB/TrEMBL
      A0A6J0VIT7
      Related
      ENSPVIP00000020342.1, ENSPVIT00000025277.1
      Conserved Domains (1) summary
      cl21483
      Location:11 → 173
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    Nucleotide Protein
    Heading Accession and Version

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