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    NT5M 5',3'-nucleotidase, mitochondrial [ Gallus gallus (chicken) ]

    Gene ID: 416505, updated on 17-Aug-2024

    Summary

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    Symbol
    NT5Mprovided by CGNC
    Full Name
    5',3'-nucleotidase, mitochondrialprovided by CGNC
    Primary source
    CGNC:3594
    See related
    Ensembl:ENSGALG00010017495
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See NT5M in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (4762782..4769282)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (4757394..4763889)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene phospholipase D family member 6 Neighboring gene folliculin Neighboring gene COP9 signalosome subunit 3 Neighboring gene uncharacterized LOC124417208 Neighboring gene mediator complex subunit 9 Neighboring gene ras related dexamethasone induced 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-nucleotidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pyrimidine deoxyribonucleotide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5'(3')-deoxyribonucleotidase, mitochondrial
    XP_040539359.1
    XP_414809.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4762782..4769282
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_414809.8 → XP_414809.2  5'(3')-deoxyribonucleotidase, mitochondrial

      UniProtKB/TrEMBL
      A0A8V0Z2T9
      Related
      ENSGALP00010024775.1, ENSGALT00010042272.1
      Conserved Domains (1) summary
      cd02587
      Location:35 → 198
      HAD_5-3dNT; 5'(3')-deoxyribonucleotidase

    RNA

    1. XR_003077757.3 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      4757394..4763889
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040683425.2 → XP_040539359.1  5'(3')-deoxyribonucleotidase, mitochondrial

      UniProtKB/TrEMBL
      A0A8V0Z2T9
      Conserved Domains (1) summary
      cd02587
      Location:35 → 198
      HAD_5-3dNT; 5'(3')-deoxyribonucleotidase

    RNA

    1. XR_005854100.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials