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    TTHERM_00842420 dual specificity phosphatase domain protein [ Tetrahymena thermophila SB210 ]

    Gene ID: 7839198, updated on 28-Dec-2023

    Summary

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    Gene symbol
    TTHERM_00842420
    Gene description
    dual specificity phosphatase domain protein
    Locus tag
    TTHERM_00842420
    Gene type
    protein coding
    RNA name
    dual specificity phosphatase domain protein
    RefSeq status
    PROVISIONAL
    Organism
    Tetrahymena thermophila SB210 (strain: SB210)
    Lineage
    Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena
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    Genomic context

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    See TTHERM_00842420 in Genome Data Viewer
    Exon count:
    1

    NW_002475963.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein, putative Neighboring gene transmembrane protein, putative Neighboring gene hypothetical protein Neighboring gene ligand-effect modulator 3 LEM3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002475963.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbohydrate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine/serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables starch binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    dual specificity phosphatase domain protein
    XP_001027258.1
    • encoded by transcript TTHERM_00842420A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002475963.1 Reference assembly

      Range
      100309..101595
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001027258.3 → XP_001027258.1  dual specificity phosphatase domain protein [Tetrahymena thermophila SB210]

      See identical proteins and their annotated locations for XP_001027258.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      I7MMV1
      Conserved Domains (2) summary
      cd05467
      Location:16 → 104
      CBM20; The family 20 carbohydrate-binding module (CBM20), also known as the starch-binding domain, is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is ...
      cl21483
      Location:245 → 381
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    Nucleotide Protein
    Heading Accession and Version

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