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    PTP4A2 protein tyrosine phosphatase 4A2 [ Odocoileus virginianus (white-tailed deer) ]

    Gene ID: 110130623, updated on 15-Mar-2024

    Summary

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    Gene symbol
    PTP4A2
    Gene description
    protein tyrosine phosphatase 4A2
    See related
    EnsemblRapid:ENSOVIG00010014630
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Odocoileus virginianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
    Orthologs
    human mouse all
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    Genomic context

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    See PTP4A2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018342397.1 (403390..429417)

    NW_018342397.1Genomic Context describing neighboring genes Neighboring gene refilin-B pseudogene Neighboring gene 60S ribosomal protein L13a pseudogene Neighboring gene SPOC domain containing 1 Neighboring gene adhesion G protein-coupled receptor B2 Neighboring gene uncharacterized LOC110130622

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018342397 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein tyrosine phosphatase type IVA 2
    Names
    protein tyrosine phosphatase type IVA, member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ovir.te_1.0 Primary Assembly

    Genomic

    1. NW_018342397.1 Reference Ovir.te_1.0 Primary Assembly

      Range
      403390..429417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020882758.1 → XP_020738417.1  protein tyrosine phosphatase type IVA 2

      UniProtKB/TrEMBL
      A0A6J0WKP0
      Related
      ENSOVIP00010020741.1, ENSOVIT00010023424.1
      Conserved Domains (1) summary
      cd18536
      Location:1 → 155
      PTP-IVa2; protein tyrosine phosphatase type IVA 2
    Nucleotide Protein
    Heading Accession and Version

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