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    ZMYND11 zinc finger MYND-type containing 11 [ Phascolarctos cinereus (koala) ]

    Gene ID: 110211214, updated on 15-Mar-2024

    Summary

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    Gene symbol
    ZMYND11
    Gene description
    zinc finger MYND-type containing 11
    See related
    Ensembl:ENSPCIG00000013482
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Phascolarctos cinereus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
    Orthologs
    human mouse all
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    Genomic context

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    See ZMYND11 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018343990.1 (1670752..1824027)

    NW_018343990.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C1orf43 homolog Neighboring gene uncharacterized LOC110211215 Neighboring gene uncharacterized LOC110211217 Neighboring gene disco interacting protein 2 homolog C Neighboring gene La ribonucleoprotein 4B Neighboring gene apidaecins type 73-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018343990 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger MYND domain-containing protein 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference phaCin_unsw_v4.1 Primary Assembly

    Genomic

    1. NW_018343990.1 Reference phaCin_unsw_v4.1 Primary Assembly

      Range
      1670752..1824027
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020990352.1 → XP_020846011.1  zinc finger MYND domain-containing protein 11 isoform X1

      UniProtKB/TrEMBL
      A0A6P5KNP7
      Related
      ENSPCIP00000017642.1, ENSPCIT00000021749.2
      Conserved Domains (5) summary
      cd05841
      Location:272 → 353
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05492
      Location:158 → 258
      Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
      cd15537
      Location:102 → 145
      PHD_BS69; PHD finger found in protein BS69
      pfam01753
      Location:563 → 598
      zf-MYND; MYND finger
      pfam15397
      Location:489 → 558
      DUF4618; Domain of unknown function (DUF4618)

    2. XM_020990351.1 → XP_020846010.1  zinc finger MYND domain-containing protein 11 isoform X1

      UniProtKB/TrEMBL
      A0A6P5KNP7
      Related
      ENSPCIP00000045787.1, ENSPCIT00000059026.1
      Conserved Domains (5) summary
      cd05841
      Location:272 → 353
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05492
      Location:158 → 258
      Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
      cd15537
      Location:102 → 145
      PHD_BS69; PHD finger found in protein BS69
      pfam01753
      Location:563 → 598
      zf-MYND; MYND finger
      pfam15397
      Location:489 → 558
      DUF4618; Domain of unknown function (DUF4618)

    3. XM_020990353.1 → XP_020846012.1  zinc finger MYND domain-containing protein 11 isoform X2

      UniProtKB/TrEMBL
      A0A6P5KMW9
      Conserved Domains (4) summary
      cd05841
      Location:272 → 353
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05492
      Location:158 → 258
      Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
      cd15537
      Location:102 → 145
      PHD_BS69; PHD finger found in protein BS69
      pfam15397
      Location:489 → 558
      DUF4618; Domain of unknown function (DUF4618)

    4. XM_020990354.1 → XP_020846013.1  zinc finger MYND domain-containing protein 11 isoform X3

      UniProtKB/TrEMBL
      A0A6P5KK62
      Related
      ENSPCIP00000048766.1, ENSPCIT00000065714.1
      Conserved Domains (4) summary
      cd05841
      Location:272 → 353
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05492
      Location:158 → 258
      Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
      cd15537
      Location:102 → 145
      PHD_BS69; PHD finger found in protein BS69
      pfam15397
      Location:489 → 558
      DUF4618; Domain of unknown function (DUF4618)

    5. XM_020990356.1 → XP_020846015.1  zinc finger MYND domain-containing protein 11 isoform X4

      UniProtKB/TrEMBL
      A0A6P5KK20
      Related
      ENSPCIP00000045291.1, ENSPCIT00000060025.1
      Conserved Domains (5) summary
      cd05841
      Location:232 → 313
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05492
      Location:118 → 218
      Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
      cd15537
      Location:62 → 105
      PHD_BS69; PHD finger found in protein BS69
      pfam01753
      Location:523 → 558
      zf-MYND; MYND finger
      pfam15397
      Location:449 → 518
      DUF4618; Domain of unknown function (DUF4618)

    6. XM_020990355.1 → XP_020846014.1  zinc finger MYND domain-containing protein 11 isoform X4

      UniProtKB/TrEMBL
      A0A6P5KK20
      Related
      ENSPCIP00000017647.2, ENSPCIT00000021754.2
      Conserved Domains (5) summary
      cd05841
      Location:232 → 313
      BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
      cd05492
      Location:118 → 218
      Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
      cd15537
      Location:62 → 105
      PHD_BS69; PHD finger found in protein BS69
      pfam01753
      Location:523 → 558
      zf-MYND; MYND finger
      pfam15397
      Location:449 → 518
      DUF4618; Domain of unknown function (DUF4618)

    RNA

    1. XR_002325306.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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