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    CIMG_03928 uncharacterized protein [ Coccidioides immitis RS ]

    Gene ID: 4564071, updated on 31-Oct-2024

    Summary

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    Gene symbol
    CIMG_03928
    Gene description
    uncharacterized protein
    Locus tag
    CIMG_03928
    See related
    FungiDB:CIMG_03928; VEuPathDB:CIMG_03928
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Coccidioides immitis RS (strain: RS)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides
    Orthologs
    Aspergillus fumigatus all
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    Genomic context

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    See CIMG_03928 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_004504312.1Genomic Context describing neighboring genes Neighboring gene 3-oxo-5-alpha-steroid 4-dehydrogenase Neighboring gene Alkbh6 protein Neighboring gene peptidyl-prolyl cis-trans isomerase pin4 Neighboring gene UDP-Glc/Gal endoplasmic reticulum nucleotide sugar transporter Neighboring gene transcription factor SipA3 Neighboring gene ribosome biogenesis protein Kri1 Neighboring gene ADP/ATP carrier protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004504312.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA-type intron splice site recognition and cleavage IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of tRNA-intron endonuclease complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_004504312.1 Reference assembly

      Range
      2547235..2548221
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001244486.2 → XP_001244487.1  uncharacterized protein CIMG_03928 [Coccidioides immitis RS]

      See identical proteins and their annotated locations for XP_001244487.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0E1RWY0, A0A0J6YM11, A0A0J8RXK5, A0A0J8TZW9
      Conserved Domains (1) summary
      pfam09631
      Location:32 → 188
      Sen15; Sen15 protein
    Nucleotide Protein
    Heading Accession and Version

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