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    PTPRA protein tyrosine phosphatase receptor type A [ Numida meleagris (helmeted guineafowl) ]

    Gene ID: 110397566, updated on 15-Mar-2024

    Summary

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    Gene symbol
    PTPRA
    Gene description
    protein tyrosine phosphatase receptor type A
    See related
    Ensembl:ENSNMEG00000005143
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Numida meleagris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Numididae; Numida
    Orthologs
    human mouse all
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    Genomic context

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    See PTPRA in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    100 current NumMel1.0 (GCF_002078875.1) 4 NC_034412.1 (95185248..95284878)

    Chromosome 4 - NC_034412.1Genomic Context describing neighboring genes Neighboring gene pantothenate kinase 2 Neighboring gene mitochondrial antiviral signaling protein Neighboring gene mitochondrial ribosomal protein S26 Neighboring gene neurophysin 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_034412.1 Chromosome 4 Reference NumMel1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    receptor-type tyrosine-protein phosphatase alpha

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Numida meleagris Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NumMel1.0 Primary Assembly

    Genomic

    1. NC_034412.1 Reference NumMel1.0 Primary Assembly

      Range
      95185248..95284878
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021394000.1 → XP_021249675.1  receptor-type tyrosine-protein phosphatase alpha isoform X1

      Related
      ENSNMEP00000004798.1, ENSNMET00000008362.1
      Conserved Domains (3) summary
      smart00194
      Location:259 → 519
      PTPc; Protein tyrosine phosphatase, catalytic domain
      cd00047
      Location:579 → 809
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
      cl25496
      Location:54 → 162
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    2. XM_021393999.1 → XP_021249674.1  receptor-type tyrosine-protein phosphatase alpha isoform X1

      Related
      ENSNMEP00000004806.1, ENSNMET00000008370.1
      Conserved Domains (3) summary
      smart00194
      Location:259 → 519
      PTPc; Protein tyrosine phosphatase, catalytic domain
      cd00047
      Location:579 → 809
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
      cl25496
      Location:54 → 162
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    3. XM_021394001.1 → XP_021249676.1  receptor-type tyrosine-protein phosphatase alpha isoform X1

      Conserved Domains (3) summary
      smart00194
      Location:259 → 519
      PTPc; Protein tyrosine phosphatase, catalytic domain
      cd00047
      Location:579 → 809
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
      cl25496
      Location:54 → 162
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    4. XM_021394002.1 → XP_021249677.1  receptor-type tyrosine-protein phosphatase alpha isoform X2

      Related
      ENSNMEP00000004811.1, ENSNMET00000008375.1
      Conserved Domains (3) summary
      smart00194
      Location:246 → 506
      PTPc; Protein tyrosine phosphatase, catalytic domain
      cd00047
      Location:566 → 796
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
      cl25496
      Location:41 → 149
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    Nucleotide Protein
    Heading Accession and Version

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