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    LOC110454494 40S ribosomal protein S27-like [ Mizuhopecten yessoensis (Yesso scallop) ]

    Gene ID: 110454494, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC110454494
    Gene description
    40S ribosomal protein S27-like
    See related
    EnsemblRapid:LOC110454494
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mizuhopecten yessoensis
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Mizuhopecten
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    Genomic context

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    See LOC110454494 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM211388v2 (GCF_002113885.1) Unplaced Scaffold NW_018407279.1 (216481..221677)

    NW_018407279.1Genomic Context describing neighboring genes Neighboring gene ras-related protein Rab-31-like Neighboring gene ras-related protein Rab-8A-like Neighboring gene ras-related protein Rab-3A-like Neighboring gene uncharacterized LOC110454488

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018407279 Unplaced Scaffold Reference ASM211388v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ribosomal small subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S27-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mizuhopecten yessoensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM211388v2 Primary Assembly

    Genomic

    1. NW_018407279.1 Reference ASM211388v2 Primary Assembly

      Range
      216481..221677
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021504007.1 → XP_021359682.1  40S ribosomal protein S27-like

      Related
      XP_021359682.1, XM_021504007.1
      Conserved Domains (1) summary
      PLN00209
      Location:6 → 82
      PLN00209; ribosomal protein S27; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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