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    LOC110979539 gamma-tubulin complex component 5-like [ Acanthaster planci (crown-of-thorns starfish) ]

    Gene ID: 110979539, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC110979539
    Gene description
    gamma-tubulin complex component 5-like
    See related
    EnsemblRapid:LOC110979539
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acanthaster planci
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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    Genomic context

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    See LOC110979539 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091408.1 (1608025..1627970)

    NW_019091408.1Genomic Context describing neighboring genes Neighboring gene hydroxyacid oxidase 1-like Neighboring gene 40S ribosomal protein S8-like Neighboring gene uncharacterized LOC110979538 Neighboring gene chondroadherin-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019091408 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables gamma-tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule minus-end binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in meiotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in microtubule nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spindle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in equatorial microtubule organizing center IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of gamma-tubulin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle pole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma-tubulin complex component 5-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OKI-Apl_1.0 Primary Assembly

    Genomic

    1. NW_019091408.1 Reference OKI-Apl_1.0 Primary Assembly

      Range
      1608025..1627970
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022235418.1 → XP_022091110.1  gamma-tubulin complex component 5-like isoform X1

      UniProtKB/TrEMBL
      A0A8B7YFD6
      Related
      XP_022091110.1, XM_022235418.1
      Conserved Domains (1) summary
      pfam04130
      Location:280 → 962
      Spc97_Spc98; Spc97 / Spc98 family

    2. XM_022235419.1 → XP_022091111.1  gamma-tubulin complex component 5-like isoform X2

      UniProtKB/TrEMBL
      A0A8B7YHK3
      Related
      XP_022091111.1, XM_022235419.1
      Conserved Domains (1) summary
      pfam04130
      Location:280 → 953
      Spc97_Spc98; Spc97 / Spc98 family
    Nucleotide Protein
    Heading Accession and Version

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