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    DNAL4 dynein axonemal light chain 4 [ Bos taurus (domestic cattle) ]

    Gene ID: 618379, updated on 7-Dec-2024

    Summary

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    Official Symbol
    DNAL4provided by VGNC
    Official Full Name
    dynein axonemal light chain 4provided by VGNC
    Primary source
    VGNC:VGNC:56196
    See related
    Ensembl:ENSBTAG00000049822
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See DNAL4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (110402454..110414611, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene Josephin domain containing 1 Neighboring gene GTP binding protein 1 Neighboring gene Sad1 and UNC84 domain containing 2 Neighboring gene neuronal pentraxin receptor Neighboring gene chromobox 6 Neighboring gene microRNA mir-2285m-4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein intermediate chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables dynein light intermediate chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule-based process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of dynein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dynein axonemal light chain 4
    Names
    dynein light chain 4, axonemal

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080918.1 → NP_001074387.1  dynein axonemal light chain 4

      See identical proteins and their annotated locations for NP_001074387.1

      Status: PROVISIONAL

      Source sequence(s)
      BC110007
      UniProtKB/Swiss-Prot
      Q32KN5
      Related
      ENSBTAP00000068101.1, ENSBTAT00000068279.2
      Conserved Domains (1) summary
      cd21453
      Location:21 → 103
      DLC-like_DNAL4; dynein light chain (DLC)-like domain found in axonemal dynein light chain 4 (DNAL4) and similar proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      110402454..110414611 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059886758.1 → XP_059742741.1  dynein axonemal light chain 4 isoform X2

      UniProtKB/TrEMBL
      A0AAA9S7U1, A0AAA9TTP3
      Related
      ENSBTAP00000100739.1, ENSBTAT00000098504.1

    2. XM_024992237.2 → XP_024848005.1  dynein axonemal light chain 4 isoform X1

      UniProtKB/TrEMBL
      A0AAA9T9A7
      Related
      ENSBTAP00000094582.1, ENSBTAT00000103303.1
      Conserved Domains (1) summary
      pfam01221
      Location:20 → 84
      Dynein_light; Dynein light chain type 1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q32KN5.1 GenPept UniProtKB/Swiss-Prot:Q32KN5

    Gene LinkOut

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