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    NCKAP5 NCK associated protein 5 [ Delphinapterus leucas (beluga whale) ]

    Gene ID: 111183388, updated on 15-Mar-2024

    Summary

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    Gene symbol
    NCKAP5
    Gene description
    NCK associated protein 5
    See related
    Ensembl:ENSDLEG00000016766
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Delphinapterus leucas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
    Orthologs
    human mouse all
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    Genomic context

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    See NCKAP5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022097997.1 (15177623..16236546, complement)
    100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160898.1 (15181411..16240337, complement)

    NW_022097997.1Genomic Context describing neighboring genes Neighboring gene 60S acidic ribosomal protein P1 pseudogene Neighboring gene G protein-coupled receptor 39 Neighboring gene LY6/PLAUR domain containing 1 Neighboring gene ribonucleoside-diphosphate reductase subunit M2-like Neighboring gene uncharacterized LOC111183395 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene eukaryotic translation initiation factor 4B pseudogene Neighboring gene leucine-rich repeat-containing protein 37B-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in microtubule bundle formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in microtubule depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule plus-end IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nck-associated protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM228892v3 Primary Assembly

    Genomic

    1. NW_022097997.1 Reference ASM228892v3 Primary Assembly

      Range
      15177623..16236546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022590668.2 → XP_022446376.1  nck-associated protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A2Y9PM91
      Related
      ENSDLEP00000023120.1, ENSDLET00000025448.1
      Conserved Domains (3) summary
      pfam15246
      Location:1465 → 1773
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:4 → 275
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:826 → 1103
      Atrophin-1; Atrophin-1 family

    2. XM_022590672.2 → XP_022446380.1  nck-associated protein 5 isoform X7

      UniProtKB/TrEMBL
      A0A2Y9PKT5
      Conserved Domains (3) summary
      pfam15246
      Location:1465 → 1773
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:4 → 275
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:826 → 1103
      Atrophin-1; Atrophin-1 family

    3. XM_022590670.2 → XP_022446378.1  nck-associated protein 5 isoform X5

      UniProtKB/TrEMBL
      A0A2Y9PTT5
      Related
      ENSDLEP00000023164.1, ENSDLET00000025496.1
      Conserved Domains (3) summary
      pfam15246
      Location:1465 → 1773
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:4 → 275
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:826 → 1103
      Atrophin-1; Atrophin-1 family

    4. XM_022590664.1 → XP_022446372.1  nck-associated protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A2Y9PSS1
      Conserved Domains (3) summary
      pfam15246
      Location:1465 → 1773
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:4 → 275
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:826 → 1103
      Atrophin-1; Atrophin-1 family

    5. XM_022590665.1 → XP_022446373.1  nck-associated protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A2Y9PSS1
      Conserved Domains (3) summary
      pfam15246
      Location:1465 → 1773
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:4 → 275
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:826 → 1103
      Atrophin-1; Atrophin-1 family

    6. XM_022590667.2 → XP_022446375.1  nck-associated protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A2Y9PKT0
      Conserved Domains (3) summary
      pfam15246
      Location:1464 → 1772
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:4 → 275
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:825 → 1102
      Atrophin-1; Atrophin-1 family

    7. XM_022590673.1 → XP_022446381.1  nck-associated protein 5 isoform X8

      UniProtKB/TrEMBL
      A0A2Y9PM96
      Conserved Domains (3) summary
      pfam15246
      Location:1361 → 1669
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:2 → 150
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:722 → 999
      Atrophin-1; Atrophin-1 family

    8. XM_022590671.1 → XP_022446379.1  nck-associated protein 5 isoform X6

      UniProtKB/TrEMBL
      A0A2Y9PHG8
      Conserved Domains (3) summary
      pfam15246
      Location:1397 → 1705
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:3 → 252
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:758 → 1035
      Atrophin-1; Atrophin-1 family

    9. XM_022590675.2 → XP_022446383.1  nck-associated protein 5 isoform X10

      UniProtKB/TrEMBL
      A0A2Y9PTU0
      Conserved Domains (2) summary
      pfam15246
      Location:367 → 459
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:4 → 258
      SMC_N; RecF/RecN/SMC N terminal domain

    10. XM_022590669.2 → XP_022446377.1  nck-associated protein 5 isoform X4

      UniProtKB/TrEMBL
      A0A2Y9PSS6
      Conserved Domains (3) summary
      pfam15246
      Location:1465 → 1773
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:4 → 275
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:826 → 1103
      Atrophin-1; Atrophin-1 family

    11. XM_022590674.2 → XP_022446382.1  nck-associated protein 5 isoform X9

      UniProtKB/TrEMBL
      A0A2Y9PST1
      Conserved Domains (3) summary
      pfam15246
      Location:1465 → 1773
      NCKAP5; Nck-associated protein 5, Peripheral clock protein
      cl25732
      Location:4 → 275
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:826 → 1103
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein
    Heading Accession and Version

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