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    OT_ostta03g00540 P-loop containing nucleoside triphosphate hydrolase [ Ostreococcus tauri ]

    Gene ID: 34945650, updated on 16-Nov-2023

    Summary

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    Gene symbol
    OT_ostta03g00540
    Gene description
    P-loop containing nucleoside triphosphate hydrolase
    Locus tag
    OT_ostta03g00540
    Gene type
    protein coding
    RNA name
    P-loop containing nucleoside triphosphate hydrolase
    RefSeq status
    PROVISIONAL
    Organism
    Ostreococcus tauri (strain: RCC4221)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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    Genomic context

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    See OT_ostta03g00540 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_014428.2 (96569..97401)

    Chromosome 3 - NC_014428.2Genomic Context describing neighboring genes Neighboring gene Phospholipid methyltransferase Neighboring gene unnamed product Neighboring gene Histidine phosphatase superfamily, clade-1 Neighboring gene unnamed product

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_014428.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
    2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATPase-coupled transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    P-loop containing nucleoside triphosphate hydrolase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014428.2 Reference assembly

      Range
      96569..97401
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022984672.1 → XP_022838413.1  P-loop containing nucleoside triphosphate hydrolase, partial [Ostreococcus tauri]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A096P7J8
      Conserved Domains (1) summary
      cd03225
      Location:36 → 244
      ABC_cobalt_CbiO_domain1; First domain of the ATP-binding cassette component of cobalt transport system
    Nucleotide Protein
    Heading Accession and Version

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