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    LOC138324026 myosin heavy chain, striated muscle [ Argopecten irradians (bay scallop) ]

    Gene ID: 138324026, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC138324026
    Gene description
    myosin heavy chain, striated muscle
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Argopecten irradians
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Argopecten
    Also known as
    MHC; catchin
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    Genomic context

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    See LOC138324026 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    41
    Annotation release Status Assembly Chr Location
    RS_2024_10 current Ai_NY (GCF_041381155.1) 5 NC_091138.1 (45927147..45952783)

    Chromosome 5 - NC_091138.1Genomic Context describing neighboring genes Neighboring gene 227 kDa spindle- and centromere-associated protein-like Neighboring gene meiosis inhibitor protein 1-like Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase family member 5-like Neighboring gene dentin sialophosphoprotein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_091138.1 Chromosome 5 Reference Ai_NY

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Scallop striated and smooth muscle myosin heavy-chain isoforms are produced by alternative RNA splicing from a single gene. Nyitray L, et al. Proc Natl Acad Sci U S A, 1994 Dec 20. PMID 7809102, Free PMC Article
    2. Nucleotide sequence of full length cDNA for a scallop striated muscle myosin heavy chain. Nyitray L, et al. Nucleic Acids Res, 1990 Dec 11. PMID 2263488, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microfilament motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sarcomere organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of myosin II complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in myosin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myosin heavy chain, striated muscle
    Names
    myosin heavy chain cardiac muscle specific
    myosin heavy chain catch (smooth) muscle specific isoform
    myosin heavy chain striated muscle specific isoform

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_041381155.1-RS_2024_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ai_NY

    Genomic

    1. NC_091138.1 Reference Ai_NY

      Range
      45927147..45952783
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_069269016.1 → XP_069125117.1  myosin heavy chain, striated muscle isoform X9

    2. XM_069269017.1 → XP_069125118.1  myosin heavy chain, striated muscle isoform X10

    3. XM_069269008.1 → XP_069125109.1  myosin heavy chain, striated muscle isoform X1

    4. XM_069269018.1 → XP_069125119.1  myosin heavy chain, striated muscle isoform X11

      UniProtKB/TrEMBL
      Q17042

    5. XM_069269009.1 → XP_069125110.1  myosin heavy chain, striated muscle isoform X2

    6. XM_069269010.1 → XP_069125111.1  myosin heavy chain, striated muscle isoform X3

    7. XM_069269011.1 → XP_069125112.1  myosin heavy chain, striated muscle isoform X4

    8. XM_069269021.1 → XP_069125122.1  myosin heavy chain, striated muscle isoform X14

    9. XM_069269015.1 → XP_069125116.1  myosin heavy chain, striated muscle isoform X8

    10. XM_069269019.1 → XP_069125120.1  myosin heavy chain, striated muscle isoform X12

    11. XM_069269020.1 → XP_069125121.1  myosin heavy chain, striated muscle isoform X13

      UniProtKB/Swiss-Prot
      P24733

    12. XM_069269012.1 → XP_069125113.1  myosin heavy chain, striated muscle isoform X5

    13. XM_069269013.1 → XP_069125114.1  myosin heavy chain, striated muscle isoform X6

    14. XM_069269014.1 → XP_069125115.1  myosin heavy chain, striated muscle isoform X7

    RNA

    1. XR_011208609.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P24733.1 GenPept UniProtKB/Swiss-Prot:P24733

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