U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC111415330 thyroid receptor-interacting protein 6 [ Onthophagus taurus ]

    Gene ID: 111415330, updated on 10-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC111415330
    Gene description
    thyroid receptor-interacting protein 6
    See related
    EnsemblRapid:LOC111415330
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Onthophagus taurus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Scarabaeiformia; Scarabaeidae; Scarabaeinae; Onthophagini; Onthophagus
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC111415330 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Otau_2.0 (GCF_000648695.1) Unplaced Scaffold NW_019280537.1 (120821..127760, complement)

    NW_019280537.1Genomic Context describing neighboring genes Neighboring gene translational activator of cytochrome c oxidase 1 Neighboring gene protein trapped in endoderm-1-like Neighboring gene protein FAM173B Neighboring gene transcription factor 15-like Neighboring gene endochitinase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_019280537 Unplaced Scaffold Reference Otau_2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    thyroid receptor-interacting protein 6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Onthophagus taurus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Otau_2.0

    Genomic

    1. NW_019280537.1 Reference Otau_2.0

      Range
      120821..127760 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023046949.1 → XP_022902717.1  thyroid receptor-interacting protein 6 isoform X2

      Related
      XP_022902717.1, XM_023046949.1
      Conserved Domains (3) summary
      cd09354
      Location:422 → 481
      LIM2_LPP; The second LIM domain of lipoma preferred partner (LPP)
      cd09437
      Location:482 → 549
      LIM3_LPP; The third LIM domain of lipoma preferred partner (LPP)
      cl02475
      Location:362 → 415
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    2. XM_023046948.1 → XP_022902716.1  thyroid receptor-interacting protein 6 isoform X1

      Related
      XP_022902716.1, XM_023046948.1
      Conserved Domains (3) summary
      cd09354
      Location:428 → 487
      LIM2_LPP; The second LIM domain of lipoma preferred partner (LPP)
      cd09437
      Location:488 → 555
      LIM3_LPP; The third LIM domain of lipoma preferred partner (LPP)
      cl02475
      Location:368 → 421
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases