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    yliI aldose sugar dehydrogenase YliI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945467, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yliI
    Official Full Name
    aldose sugar dehydrogenase YliI
    Primary source
    ECOCYC:G6437
    Locus tag
    b0837
    See related
    ASAP:ABE-0002852
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0827
    Summary
    Predicted 20 aa signal peptide is consistent with an observed secB-dependent precursor cleavage that is blocked by azide (Marani, 2006). [More information is available at EcoGene: EG13480]. YliI is an aldose sugar dehydrogenase that requires the cofactor pyrroloquinoline quinone (PQQ) for activity . [More information is available at EcoCyc: G6437].
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    Genomic context

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    Sequence:
    NC_000913.3 (878742..879857)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribosomal protein S12 methylthiotransferase RimO Neighboring gene regulator of biofilm formation Neighboring gene glutathione S-transferase GstB Neighboring gene D-alanyl-D-alanine carboxypeptidase DacC Neighboring gene DNA-binding transcriptional repressor DeoR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Escherichia coli is unable to produce pyrroloquinoline quinone (PQQ). Matsushita K, et al. Microbiology (Reading), 1997 Oct. PMID 9353919
    2. Pyrroloquinoline quinone, a chemotactic attractant for Escherichia coli. de Jonge R, et al. J Bacteriol, 1996 Feb. PMID 8576064, Free PMC Article
    3. Soluble aldose sugar dehydrogenase from Escherichia coli: a highly exposed active site conferring broad substrate specificity. Southall SM, et al. J Biol Chem, 2006 Oct 13. PMID 16864586
    4. Identification of conserved, RpoS-dependent stationary-phase genes of Escherichia coli. Schellhorn HE, et al. J Bacteriol, 1998 Dec. PMID 9829938, Free PMC Article
    5. Fishing new proteins in the twilight zone of genomes: the test case of outer membrane proteins in Escherichia coli K12, Escherichia coli O157:H7, and other Gram-negative bacteria. Casadio R, et al. Protein Sci, 2003 Jun. PMID 12761386, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables calcium ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables pyrroloquinoline quinone binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in outer membrane-bounded periplasmic space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aldose sugar dehydrogenase YliI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      878742..879857
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415358.1 aldose sugar dehydrogenase YliI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415358.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3P5DNX3
      Conserved Domains (1) summary
      pfam07995
      Location:34 → 362
      GSDH; Glucose / Sorbosone dehydrogenase
    Nucleotide Protein
    Heading Accession and Version

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