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    FFUJ_03165 probable 40S ribosomal protein S12 [ Fusarium fujikuroi IMI 58289 ]

    Gene ID: 35396647, updated on 17-May-2024

    Summary

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    Gene symbol
    FFUJ_03165
    Gene description
    probable 40S ribosomal protein S12
    Locus tag
    FFUJ_03165
    See related
    FungiDB:FFUJ_03165; VEuPathDB:FFUJ_03165
    Gene type
    protein coding
    RNA name
    probable 40S ribosomal protein S12
    RefSeq status
    PROVISIONAL
    Organism
    Fusarium fujikuroi IMI 58289 (strain: IMI 58289)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium fujikuroi species complex
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    Genomic context

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    See FFUJ_03165 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_036624.1 (3469503..3470147, complement)

    Chromosome III - NC_036624.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene probable peptidyl-prolyl cis-trans isomerase nima-interacting 4 Neighboring gene probable ribosomal protein S15a.e.c10, cytosolic Neighboring gene related to capsular associated protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036624.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Deciphering the cryptic genome: genome-wide analyses of the rice pathogen Fusarium fujikuroi reveal complex regulation of secondary metabolism and novel metabolites. Wiemann P, et al. PLoS Pathog, 2013. PMID 23825955, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    probable 40S ribosomal protein S12

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_036624.1 Reference assembly

      Range
      3469503..3470147 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023574981.1 → XP_023428837.1  probable 40S ribosomal protein S12 [Fusarium fujikuroi IMI 58289]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0J0DMA9, S0DW76
      Conserved Domains (1) summary
      pfam01248
      Location:30 → 125
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
    Nucleotide Protein
    Heading Accession and Version

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