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    ARV1 ARV1 homolog, fatty acid homeostasis modulator [ Pan troglodytes (chimpanzee) ]

    Gene ID: 457815, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ARV1provided by VGNC
    Official Full Name
    ARV1 homolog, fatty acid homeostasis modulatorprovided by VGNC
    Primary source
    VGNC:VGNC:7347
    Locus tag
    CK820_G0023097
    See related
    Ensembl:ENSPTRG00000002102
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See ARV1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (18187397..18209461, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (213114040..213135939)

    Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 89 member A Neighboring gene E3 ubiquitin-protein ligase RNF4-like Neighboring gene microRNA mir-1182 Neighboring gene tetratricopeptide repeat domain 13 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC107970607

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intracellular sterol transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of plasma membrane sterol distribution IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingolipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sterol metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cortical endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein ARV1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      18187397..18209461 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016940784.3 → XP_016796273.1  protein ARV1 isoform X1

      UniProtKB/TrEMBL
      A0A2J8M6J7, A0A2J8M6K3, A0A6D2VYQ3, H2Q1C1, K7ARI5
      Related
      ENSPTRP00000003556.4
      Conserved Domains (1) summary
      pfam04161
      Location:33 → 222
      Arv1; Arv1-like family

    2. XM_016940789.2 → XP_016796278.1  protein ARV1 isoform X2

      UniProtKB/TrEMBL
      A0A2I3RP54, A0A2J8M6K2, A0A2J8M6K3, A0A6D2XYE5, K7ARI5
      Related
      ENSPTRP00000066447.1
      Conserved Domains (1) summary
      cl21705
      Location:33 → 182
      Arv1; Arv1-like family
    Nucleotide Protein
    Heading Accession and Version

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