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    MRPS27 mitochondrial ribosomal protein S27 [ Equus caballus (horse) ]

    Gene ID: 100073298, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MRPS27provided by VGNC
    Official Full Name
    mitochondrial ribosomal protein S27provided by VGNC
    Primary source
    VGNC:VGNC:20364
    See related
    Ensembl:ENSECAG00000008099
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See MRPS27 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 14 NC_009157.3 (92454526..92542924)

    Chromosome 14 - NC_009157.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111767927 Neighboring gene pentatricopeptide repeat domain 2 Neighboring gene microtubule associated protein 1B Neighboring gene uncharacterized LOC102149900

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009157.3 Chromosome 14 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small ribosomal subunit protein mS27

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009157.3 Reference EquCab3.0 Primary Assembly

      Range
      92454526..92542924
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001504031.5 → XP_001504081.3  small ribosomal subunit protein mS27

      UniProtKB/TrEMBL
      F6TCA0
      Related
      ENSECAP00000006254.3, ENSECAT00000008362.3
      Conserved Domains (2) summary
      sd00004
      Location:108 → 135
      PPR; PPR repeat [structural motif]
      pfam10037
      Location:1 → 412
      MRP-S27; Mitochondrial 28S ribosomal protein S27
    Nucleotide Protein
    Heading Accession and Version

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