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    LINJ_36_4600 putative alternative oxidase [ Leishmania infantum JPCM5 ]

    Gene ID: 5073940, updated on 30-Oct-2024

    Summary

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    Gene symbol
    LINJ_36_4600
    Gene description
    putative alternative oxidase
    Locus tag
    LINJ_36_4600
    Gene type
    protein coding
    RNA name
    putative alternative oxidase
    RefSeq status
    PROVISIONAL
    Organism
    Leishmania infantum JPCM5 (strain: JPCM5)
    Lineage
    Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
    Orthologs
    Leishmania major all
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    Genomic context

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    See LINJ_36_4600 in Genome Data Viewer
    Location:
    chromosome: 36
    Exon count:
    1
    Sequence:
    Chromosome: 36; NC_009420.2 (1698560..1700020)

    Chromosome 36 - NC_009420.2Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein Neighboring gene putative gamma-tubulin complex subunit Neighboring gene ATP-dependent RNA helicase-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009420.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
    2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alternative oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in alternative respiration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    putative alternative oxidase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009420.2 Reference assembly

      Range
      1698560..1700020
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001469799.1 → XP_001469836.1  putative alternative oxidase [Leishmania infantum JPCM5]

      See identical proteins and their annotated locations for XP_001469836.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2K4Z8J9, A0A381MX12, A0A6L0Y2G3, A4IDL7
      Conserved Domains (1) summary
      pfam01786
      Location:91 → 466
      AOX; Alternative oxidase
    Nucleotide Protein
    Heading Accession and Version

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