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    CNBN1890 hypothetical protein [ Cryptococcus neoformans var. neoformans B-3501A ]

    Gene ID: 4939802, updated on 17-May-2024

    Summary

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    Gene symbol
    CNBN1890
    Gene description
    hypothetical protein
    Locus tag
    CNBN1890
    See related
    FungiDB:CNBN1890; VEuPathDB:CNBN1890
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cryptococcus neoformans var. neoformans B-3501A (strain: B-3501A, variety: neoformans, serotype: D)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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    Genomic context

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    See CNBN1890 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    7
    Sequence:
    Chromosome: 14; NC_009190.1 (553586..556931)

    Chromosome 14 - NC_009190.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene putative mitochondrial 37S ribosomal protein MRPS12 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009190.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    hypothetical protein
    XP_772011.1
    • Similar to gi|46095735|gb|EAK80968.1| hypothetical protein UM00516.1 [Ustilago maydis 521], FASTA scores: opt: 929, E(): 9.2e-39, (34.864% identity (58.950% similar) in 1067 aa overlap (12-880:36-1072)); HMMPfam hit to RRM_1, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), score: 191.9, E(): 1.2e-54
    XP_772012.1
    • Similar to gi|46095735|gb|EAK80968.1| hypothetical protein UM00516.1 [Ustilago maydis 521], FASTA scores: opt: 929, E(): 4.8e-38, (35.060% identity (58.649% similar) in 1081 aa overlap (12-903:36-1073)); HMMPfam hit to RRM_1, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), score: 191.9, E(): 1.2e-54

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009190.1 Reference assembly

      Range
      553586..556931
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_766919.1 → XP_772012.1  hypothetical protein CNBN1890 [Cryptococcus neoformans var. neoformans B-3501A]

      See identical proteins and their annotated locations for XP_772012.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A854Q531, Q55HC9, Q5K6W9
      Conserved Domains (5) summary
      COG0724
      Location:410 → 482
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd00590
      Location:138 → 212
      RRM_SF; RNA recognition motif (RRM) superfamily
      cd12413
      Location:25 → 105
      RRM1_RBM28_like; RNA recognition motif 1 in RNA-binding protein 28 (RBM28) and similar proteins
      cd12416
      Location:607 → 734
      RRM4_RBM28_like; RNA recognition motif 4 in RNA-binding protein 28 (RBM28) and similar proteins
      cl17169
      Location:419 → 540
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_766918.1 → XP_772011.1  hypothetical protein CNBN1890 [Cryptococcus neoformans var. neoformans B-3501A]

      See identical proteins and their annotated locations for XP_772011.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A854Q531
      Conserved Domains (5) summary
      COG0724
      Location:410 → 482
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd00590
      Location:138 → 212
      RRM_SF; RNA recognition motif (RRM) superfamily
      cd12413
      Location:25 → 105
      RRM1_RBM28_like; RNA recognition motif 1 in RNA-binding protein 28 (RBM28) and similar proteins
      cd12416
      Location:607 → 734
      RRM4_RBM28_like; RNA recognition motif 4 in RNA-binding protein 28 (RBM28) and similar proteins
      cl17169
      Location:419 → 540
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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