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    U57 major capsid protein [ Human betaherpesvirus 6A ]

    Gene ID: 1487939, updated on 6-Jun-2024

    Summary

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    Gene symbol
    U57
    Gene description
    major capsid protein
    Locus tag
    HHV6gp50
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Human betaherpesvirus 6A (isolate: U1102, nat-host: Homo sapiens)
    Lineage
    Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus
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    Genomic context

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    Sequence:
    NC_001664.4 (89927..93964, complement)

    NC_001664.4Genomic Context describing neighboring genes Neighboring gene U55 Neighboring gene U56 Neighboring gene U58 Neighboring gene U59 Neighboring gene U60/66 Neighboring gene U62 Neighboring gene U63

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001664.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Human herpesvirus-6 glycoprotein H and L homologs are components of the gp100 complex and the gH external domain is the target for neutralizing monoclonal antibodies. Liu DX, et al. Virology, 1993 Nov. PMID 7692666
    2. Identification and characterization of a human herpesvirus 6 gene segment that trans activates the human immunodeficiency virus type 1 promoter. Geng YQ, et al. J Virol, 1992 Mar. PMID 1310766, Free PMC Article
    3. The right end of the unique region of the genome of human herpesvirus 6 U1102 contains a candidate immediate early gene enhancer and a homologue of the human cytomegalovirus US22 gene family. Thomson BJ, et al. J Gen Virol, 1992 Jul. PMID 1321205
    4. Identification of homologues to the human cytomegalovirus US22 gene family in human herpesvirus 6. Efstathiou S, et al. J Gen Virol, 1992 Jul. PMID 1321206
    5. Infectivity determinants encoded in a conserved gene block of human herpesvirus-6. Gompels UA, et al. DNA Seq, 1992. PMID 1333836

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    major capsid protein
    NP_042950.2
    • 4L, mcp; similar to HHV-5 UL86 (MCP), HVS GENE 25, EBV BcLF1, EHV1 42, VZV 40, HSV1 UL19

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001664.4 Reference assembly

      Range
      89927..93964 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_042950.2 major capsid protein [Human betaherpesvirus 6A]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P17887
      UniProtKB/TrEMBL
      A0A0A7RM42, M9TNG3
      Conserved Domains (1) summary
      pfam03122
      Location:13 → 1341
      Herpes_MCP; Herpes virus major capsid protein
    Nucleotide Protein
    Heading Accession and Version

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