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    LOC100126887 cytochrome P-450 8 [ Zea mays ]

    Gene ID: 100126887, updated on 27-Nov-2024

    Summary

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    Gene symbol
    LOC100126887
    Gene description
    cytochrome P-450 8
    Locus tag
    ZEAMMB73_Zm00001d033020
    See related
    EnsemblRapid:Zm00001eb048540
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    cyp8; cyp78; GRMZM2G167986
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    Genomic context

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    See LOC100126887 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (249356626..249358909)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (247312010..247314293)

    Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100281254 Neighboring gene TPD1 Neighboring gene uncharacterized LOC109942153 Neighboring gene uncharacterized LOC100382239

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration. Sun X, et al. Nat Commun, 2017 Mar 16. PMID 28300078, Free PMC Article
    2. Isolation of a cytochrome P450 homologue preferentially expressed in developing inflorescences of Zea mays. Larkin JC. Plant Mol Biol, 1994 Jun. PMID 8049361
    3. Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Gardiner J, et al. Plant Physiol, 2004 Apr. PMID 15020742, Free PMC Article
    4. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    5. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data suggest that PLASTOCHRON1 (ZmPLA1) gene, encoding a cytochrome P450 (CYP78A1), may function through an increase in auxin.
      Title: Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome P450 78A1
    Names
    CL2385_1
    CYP78A1
    CYPLXXVIII
    Cytochrome P450 CYP78A1
    cl2385_1(78)
    cyp*-L23209
    cytochrome P-450 candidate

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001112599.2 → NP_001106069.2  cytochrome P450 78A1

      See identical proteins and their annotated locations for NP_001106069.2

      Status: VALIDATED

      Source sequence(s)
      CABHLF010000010
      UniProtKB/TrEMBL
      A0A1D6KVT1, A0A317Y7N9, A0A8J8XJF6, B6U102
      Related
      Zm00001eb048540_P001, Zm00001eb048540_T001
      Conserved Domains (1) summary
      cl12078
      Location:33 → 548
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      249356626..249358909
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P48420.1 GenPept UniProtKB/Swiss-Prot:P48420

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    Research Materials