U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    COPB2 COPI coat complex subunit beta 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 281706, updated on 30-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    COPB2provided by VGNC
    Official Full Name
    COPI coat complex subunit beta 2provided by VGNC
    Primary source
    VGNC:VGNC:27594
    See related
    BGD:BT21521; EnsemblRapid:ENSBTAG00070002720
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See COPB2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (129707549..129740550)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene retinol binding protein 1 Neighboring gene retinol binding protein 2 Neighboring gene small nucleolar RNA SNORA33 Neighboring gene mitochondrial ribosomal protein S22 Neighboring gene transfer RNA glutamic acid (anticodon UUC)

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. beta'-COP, a novel subunit of coatomer. Stenbeck G, et al. EMBO J, 1993 Jul. PMID 8334999, Free PMC Article
    2. Structure of coatomer cage proteins and the relationship among COPI, COPII, and clathrin vesicle coats. Lee C, et al. Cell, 2010 Jul 9. PMID 20579721, Free PMC Article
    3. Peroxisome biogenesis: involvement of ARF and coatomer. Passreiter M, et al. J Cell Biol, 1998 Apr 20. PMID 9548716, Free PMC Article
    4. The retrieval function of the KDEL receptor requires PKA phosphorylation of its C-terminus. Cabrera M, et al. Mol Biol Cell, 2003 Oct. PMID 14517323, Free PMC Article
    5. The debate about transport in the Golgi--two sides of the same coin? Pelham HR, et al. Cell, 2000 Sep 15. PMID 11030615

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COPI vesicle coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    coatomer subunit beta'
    Names
    beta'-COP
    beta'-coat protein
    coatomer protein complex subunit beta 2
    coatomer protein complex, subunit beta 2 (beta prime)
    p102

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174281.3 → NP_776706.2  coatomer subunit beta'

      See identical proteins and their annotated locations for NP_776706.2

      Status: PROVISIONAL

      Source sequence(s)
      BC134537
      UniProtKB/Swiss-Prot
      A4IFE1, P35605
      UniProtKB/TrEMBL
      A0AAF7AF41
      Related
      ENSBTAP00070003705.1, ENSBTAT00070006350.1
      Conserved Domains (4) summary
      COG2319
      Location:24 → 428
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:8 → 297
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      pfam04053
      Location:320 → 763
      Coatomer_WDAD; Coatomer WD associated region
      sd00039
      Location:103 → 140
      7WD40; WD40 repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      129707549..129740550
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P35605.3 GenPept UniProtKB/Swiss-Prot:P35605

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.