U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC112276261 rho-N domain-containing protein 1, chloroplastic-like [ Physcomitrium patens ]

    Gene ID: 112276261, updated on 20-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC112276261
    Gene description
    rho-N domain-containing protein 1, chloroplastic-like
    Locus tag
    PHYPA_028280
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Physcomitrium patens
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC112276261 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current Phypa V3 (GCF_000002425.4) 23 NC_037275.1 (12376158..12379679)

    Chromosome 23 - NC_037275.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112275672 Neighboring gene filament-like plant protein 4 Neighboring gene chromodomain-helicase-DNA-binding protein 1-like Neighboring gene calcium-dependent protein kinase 26-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037275.1 Chromosome 23 Reference Phypa V3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA-templated transcription termination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    rho-N domain-containing protein 1, chloroplastic-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Phypa V3 Primary Assembly

    Genomic

    1. NC_037275.1 Reference Phypa V3 Primary Assembly

      Range
      12376158..12379679
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024507411.1 → XP_024363179.1  rho-N domain-containing protein 1, chloroplastic-like isoform X1

      UniProtKB/TrEMBL
      A0A7I4CIB6
      Conserved Domains (3) summary
      PHA03325
      Location:229 → 385
      PHA03325; nuclear-egress-membrane-like protein; Provisional
      cl26247
      Location:149 → 278
      DNA_pol3_delta2; DNA polymerase III, delta subunit
      cl28310
      Location:429 → 478
      Rho; Transcription termination factor Rho [Transcription]

    2. XM_024507412.1 → XP_024363180.1  rho-N domain-containing protein 1, chloroplastic-like isoform X2

      UniProtKB/TrEMBL
      A0A2K1IJY2, A0A7I4CFZ6
      Conserved Domains (3) summary
      PHA03325
      Location:200 → 356
      PHA03325; nuclear-egress-membrane-like protein; Provisional
      cl26247
      Location:120 → 249
      DNA_pol3_delta2; DNA polymerase III, delta subunit
      cl28310
      Location:400 → 449
      Rho; Transcription termination factor Rho [Transcription]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases