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    dtd D-aminoacyl-tRNA deacylase [ Vibrio splendidus ]

    Gene ID: 72397576, updated on 13-May-2024

    Summary

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    Gene symbol
    dtd
    Gene description
    D-aminoacyl-tRNA deacylase
    Locus tag
    LTQ54_RS08160
    Gene type
    protein coding
    Organism
    Vibrio splendidus (strain: 2_C04b, nat-host: Magallana gigas)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    LTQ54_08160
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    Genomic context

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    Location:
    chromosome: 1

    1 - NZ_CP089203.1Genomic Context describing neighboring genes Neighboring gene AsmA family protein Neighboring gene bifunctional GNAT family N-acetyltransferase/hotdog fold thioesterase Neighboring gene virulence factor BrkB family protein Neighboring gene DUF2959 domain-containing protein Neighboring gene AAA family ATPase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP089203.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Recent Updates on DTD (D-Tyr-tRNA(Tyr) Deacylase): An Enzyme Essential for Fidelity and Quality of Protein Synthesis. Bhatt TK, et al. Front Cell Dev Biol, 2016. PMID 27200345, Free PMC Article
    2. Structure of crystalline D-Tyr-tRNA(Tyr) deacylase. A representative of a new class of tRNA-dependent hydrolases. Ferri-Fioni ML, et al. J Biol Chem, 2001 Dec 14. PMID 11568181

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    D-aminoacyl-tRNA deacylase
    WP_004735590.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP089203.1 Reference assembly

      Range
      1790463..1790897 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004735590.1 MULTISPECIES: D-aminoacyl-tRNA deacylase [Vibrio]

      See identical proteins and their annotated locations for WP_004735590.1

      UniProtKB/Swiss-Prot
      B7VHE8
      UniProtKB/TrEMBL
      A0A0T7DMP8, A0A1A6LBS0, A0A1C3IV39, A0A1C3IX95, A0A1C3JBW3, A0A1E5EJU2, A0A1E5FWY8, A0A1R3EYE5, A0A1R3F9F4, A0A2N7J9I1, A0A2N7NLZ6, A0A4U1WWP6, A0A4U2AM96, A0A5M9NK71, A0A7W4GNR7, A0A7Y7N2L0, A0AA34TRH2, A0AA86WRP1
      Conserved Domains (1) summary
      PRK05273
      Location:1 → 144
      PRK05273; D-tyrosyl-tRNA(Tyr) deacylase; Provisional
    Nucleotide Protein
    Heading Accession and Version