U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    ppnN nucleotide 5'-monophosphate nucleosidase PpnN [ Edwardsiella piscicida ]

    Gene ID: 72527613, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ppnN
    Gene description
    nucleotide 5'-monophosphate nucleosidase PpnN
    Locus tag
    L1P05_RS03585
    Gene type
    protein coding
    Organism
    Edwardsiella piscicida (strain: 18EpOKYJ, nat-host: Paralichthtys olivaceus (Olive flounder))
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Hafniaceae; Edwardsiella
    Old locus tag
    L1P05_03585
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_CP090968.1Genomic Context describing neighboring genes Neighboring gene DUF423 domain-containing protein Neighboring gene 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM Neighboring gene flap endonuclease Xni Neighboring gene NADPH-dependent 7-cyano-7-deazaguanine reductase QueF Neighboring gene SecY-interacting protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_CP090968.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. (p)ppGpp-Dependent Regulation of the Nucleotide Hydrolase PpnN Confers Complement Resistance in Salmonella enterica Serovar Typhimurium. Chau NYE, et al. Infect Immun, 2021 Jan 19. PMID 33139383, Free PMC Article
    2. Evolution of the bacterial nucleosidase PpnN and its relation to the stringent response. Bærentsen RL, et al. Microb Cell, 2019 Jul 16. PMID 31528633, Free PMC Article
    3. (p)ppGpp Regulates a Bacterial Nucleosidase by an Allosteric Two-Domain Switch. Zhang YE, et al. Mol Cell, 2019 Jun 20. PMID 31023582

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    nucleotide 5'-monophosphate nucleosidase PpnN
    WP_012847592.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP090968.1 Reference assembly

      Range
      801310..802674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012847592.1 nucleotide 5'-monophosphate nucleosidase PpnN [Edwardsiella piscicida]

      See identical proteins and their annotated locations for WP_012847592.1

      UniProtKB/TrEMBL
      A0AAQ3C3Q8, A0AAU8P558
      Conserved Domains (3) summary
      COG1611
      Location:136 → 338
      YgdH; Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
      pfam11892
      Location:333 → 453
      DUF3412; Domain of unknown function (DUF3412)
      pfam14793
      Location:3 → 111
      DUF4478; Domain of unknown function (DUF4478)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases