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    RABGAP1 RAB GTPase activating protein 1 [ Bubalus bubalis (water buffalo) ]

    Gene ID: 102405237, updated on 10-Mar-2024

    Summary

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    Gene symbol
    RABGAP1
    Gene description
    RAB GTPase activating protein 1
    See related
    EnsemblRapid:ENSBALG00030027171
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bubalus bubalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
    Orthologs
    human mouse all
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    Genomic context

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    See RABGAP1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    103 current NDDB_SH_1 (GCF_019923935.1) 12 NC_059168.1 (93553185..93721907)
    102 previous assembly NDDB_DH_1 (GCF_019923925.1) 12 NC_058354.1 (92978694..93147430)

    Chromosome 12 - NC_059168.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123464782 Neighboring gene zinc finger and BTB domain containing 6 Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene protein mago nashi homolog Neighboring gene G protein-coupled receptor 21 Neighboring gene spermatid perinuclear RNA binding protein Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC123328640

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    rab GTPase-activating protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NDDB_SH_1 Primary Assembly

    Genomic

    1. NC_059168.1 Reference NDDB_SH_1 Primary Assembly

      Range
      93553185..93721907
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025261634.3 → XP_025117419.1  rab GTPase-activating protein 1

      Conserved Domains (4) summary
      smart00164
      Location:563 → 772
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      COG1196
      Location:823 → 1047
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01211
      Location:145 → 273
      PTB_Rab6GAP; GTPase activating protein for Rab 6 Phosphotyrosine-binding (PTB) domain
      pfam12473
      Location:307 → 437
      DUF3694; Kinesin protein

    2. XM_044926321.2 → XP_044782256.1  rab GTPase-activating protein 1

      Related
      ENSBALP00030050971.1, ENSBALT00030075917.1
      Conserved Domains (4) summary
      smart00164
      Location:563 → 772
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      COG1196
      Location:823 → 1047
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01211
      Location:145 → 273
      PTB_Rab6GAP; GTPase activating protein for Rab 6 Phosphotyrosine-binding (PTB) domain
      pfam12473
      Location:307 → 437
      DUF3694; Kinesin protein

    3. XM_044926319.2 → XP_044782254.1  rab GTPase-activating protein 1

      Conserved Domains (4) summary
      smart00164
      Location:563 → 772
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      COG1196
      Location:823 → 1047
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01211
      Location:145 → 273
      PTB_Rab6GAP; GTPase activating protein for Rab 6 Phosphotyrosine-binding (PTB) domain
      pfam12473
      Location:307 → 437
      DUF3694; Kinesin protein

    4. XM_025261637.3 → XP_025117422.1  rab GTPase-activating protein 1

      Related
      ENSBALP00030051016.1, ENSBALT00030076002.1
      Conserved Domains (4) summary
      smart00164
      Location:563 → 772
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      COG1196
      Location:823 → 1047
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01211
      Location:145 → 273
      PTB_Rab6GAP; GTPase activating protein for Rab 6 Phosphotyrosine-binding (PTB) domain
      pfam12473
      Location:307 → 437
      DUF3694; Kinesin protein

    5. XM_025261639.3 → XP_025117424.1  rab GTPase-activating protein 1

      Conserved Domains (4) summary
      smart00164
      Location:563 → 772
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      COG1196
      Location:823 → 1047
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01211
      Location:145 → 273
      PTB_Rab6GAP; GTPase activating protein for Rab 6 Phosphotyrosine-binding (PTB) domain
      pfam12473
      Location:307 → 437
      DUF3694; Kinesin protein

    6. XM_044926320.2 → XP_044782255.1  rab GTPase-activating protein 1

      Conserved Domains (4) summary
      smart00164
      Location:563 → 772
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      COG1196
      Location:823 → 1047
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01211
      Location:145 → 273
      PTB_Rab6GAP; GTPase activating protein for Rab 6 Phosphotyrosine-binding (PTB) domain
      pfam12473
      Location:307 → 437
      DUF3694; Kinesin protein

    RNA

    1. XR_006543609.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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