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    HCK03_RS14650 helix-turn-helix domain-containing protein [ Raoultella terrigena ]

    Gene ID: 57505171, updated on 10-Dec-2024

    Summary

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    Gene symbol
    HCK03_RS14650
    Gene description
    helix-turn-helix domain-containing protein
    Locus tag
    HCK03_RS14650
    Gene type
    protein coding
    Organism
    Raoultella terrigena (strain: JH01)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Raoultella
    Old locus tag
    HCK03_14650
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    Genomic context

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    NZ_CP050508.1Genomic Context describing neighboring genes Neighboring gene DUF2554 family protein Neighboring gene U32 family peptidase Neighboring gene benzoate/H(+) symporter BenE family transporter Neighboring gene helix-turn-helix domain-containing protein Neighboring gene DMT family transporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP050508.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. DNA-binding proteins and evolution of transcription regulation in the archaea. Aravind L, et al. Nucleic Acids Res, 1999 Dec 1. PMID 10556324, Free PMC Article
    2. Cupins: the most functionally diverse protein superfamily? Dunwell JM, et al. Phytochemistry, 2004 Jan. PMID 14697267
    3. Molecular evolution of helix-turn-helix proteins. Rosinski JA, et al. J Mol Evol, 1999 Sep. PMID 10473770
    4. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    helix-turn-helix domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP050508.1 Reference assembly

      Range
      3108994..3109542 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_115192873.1 helix-turn-helix domain-containing protein [Raoultella terrigena]

      UniProtKB/TrEMBL
      A0A4U9CUD9
      Conserved Domains (2) summary
      cd00093
      Location:11 → 65
      HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
      cd02209
      Location:84 → 173
      cupin_XRE_C; XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain
    Nucleotide Protein
    Heading Accession and Version

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