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    ERCC6 ERCC excision repair 6, chromatin remodeling factor [ Nothoprocta perdicaria ]

    Gene ID: 112957725, updated on 15-Mar-2024

    Summary

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    Gene symbol
    ERCC6
    Gene description
    ERCC excision repair 6, chromatin remodeling factor
    See related
    Ensembl:ENSNPEG00000013228
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nothoprocta perdicaria
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
    Orthologs
    human mouse all
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    Genomic context

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    See ERCC6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020454217.1 (64997..103185, complement)

    NW_020454217.1Genomic Context describing neighboring genes Neighboring gene bone morphogenetic protein 7-like Neighboring gene dorsal root ganglia homeobox Neighboring gene uncharacterized LOC112958085 Neighboring gene uncharacterized LOC112958094

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020454217 Unplaced Scaffold Reference notPer1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription-coupled nucleotide-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA excision repair protein ERCC-6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference notPer1

    Genomic

    1. NW_020454217.1 Reference notPer1

      Range
      64997..103185 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026051458.1 → XP_025907243.1  DNA excision repair protein ERCC-6

      UniProtKB/TrEMBL
      A0A8C6ZUD3
      Related
      ENSNPEP00000017783.1, ENSNPET00000018228.1
      Conserved Domains (2) summary
      COG0553
      Location:365 → 1015
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cl25732
      Location:85 → 391
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein
    Heading Accession and Version

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