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    intZ putative phage integrase IntZ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946923, updated on 3-Dec-2024

    Summary

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    Official Symbol
    intZ
    Official Full Name
    putative phage integrase IntZ
    Primary source
    ECOCYC:G7272
    Locus tag
    b2442
    See related
    ASAP:ABE-0008052
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2437
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    Genomic context

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    Sequence:
    NC_000913.3 (2558858..2560066)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ethanolamine ammonia-lyase subunit beta Neighboring gene ethanolamine ammonia-lyase subunit alpha Neighboring gene uncharacterized protein YffL Neighboring gene uncharacterized protein YffM

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables prophage integrase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA integration IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in establishment of integrated proviral latency IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in provirus excision IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in symbiont entry into host cell IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in viral genome integration into host DNA IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative phage integrase IntZ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2558858..2560066
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416937.2 putative phage integrase IntZ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416937.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6G4C6T5
      Conserved Domains (1) summary
      PRK09692
      Location:5 → 400
      PRK09692; integrase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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