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    zfyve1 zinc finger, FYVE domain containing 1 [ Astatotilapia calliptera (eastern happy) ]

    Gene ID: 113007161, updated on 15-Mar-2024

    Summary

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    Gene symbol
    zfyve1
    Gene description
    zinc finger, FYVE domain containing 1
    See related
    Ensembl:ENSACLG00000006703
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Astatotilapia calliptera
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
    Orthologs
    human zebrafish all
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    Genomic context

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    See zfyve1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current fAstCal1.2 (GCF_900246225.1) 15 NC_039316.1 (4615310..4622205)

    Chromosome 15 - NC_039316.1Genomic Context describing neighboring genes Neighboring gene VPS18 core subunit of CORVET and HOPS complexes Neighboring gene ras homolog family member V Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class H Neighboring gene WD repeat domain 21 Neighboring gene double PHD fingers 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039316.1 Chromosome 15 Reference fAstCal1.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger FYVE domain-containing protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAstCal1.2 Primary Assembly

    Genomic

    1. NC_039316.1 Reference fAstCal1.2 Primary Assembly

      Range
      4615310..4622205
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026143634.1 → XP_025999419.1  zinc finger FYVE domain-containing protein 1-like

      UniProtKB/TrEMBL
      A0A3P8NYD6, A0A3P8NYL9
      Related
      ENSACLP00000009817.1, ENSACLT00000010042.1
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily

    2. XM_026143628.1 → XP_025999413.1  zinc finger FYVE domain-containing protein 1-like

      UniProtKB/TrEMBL
      A0A3P8NYD6, A0A3P8NYL9
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily

    3. XM_026143630.1 → XP_025999415.1  zinc finger FYVE domain-containing protein 1-like

      UniProtKB/TrEMBL
      A0A3P8NYD6, A0A3P8NYL9
      Related
      ENSACLP00000009811.1, ENSACLT00000010036.1
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily

    4. XM_026143631.1 → XP_025999416.1  zinc finger FYVE domain-containing protein 1-like

      UniProtKB/TrEMBL
      A0A3P8NYD6, A0A3P8NYL9
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily

    5. XM_026143632.1 → XP_025999417.1  zinc finger FYVE domain-containing protein 1-like

      UniProtKB/TrEMBL
      A0A3P8NYD6, A0A3P8NYL9
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily

    6. XM_026143633.1 → XP_025999418.1  zinc finger FYVE domain-containing protein 1-like

      UniProtKB/TrEMBL
      A0A3P8NYD6, A0A3P8NYL9
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl28890
      Location:593 → 654
      FYVE_like_SF; FYVE domain like superfamily
    Nucleotide Protein
    Heading Accession and Version

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