pipox.L pipecolic acid oxidase L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: pipox.L
Official Full Name: pipecolic acid oxidase L homeolog
Primary source: Xenbase:XB-GENE-1013126
Locus tag: XELAEV_18011686mg
See related: EnsemblRapid:ENSXLAG00005029682 AllianceGenome:Xenbase:XB-GENE-1013126
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: pipox
Summary: Predicted to enable flavin adenine dinucleotide binding activity and sarcosine oxidase activity. Orthologous to human PIPOX (pipecolic acid and sarcosine oxidase). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

Location:: chromosome: 2L

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (33178687..33202335, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (32108322..32132103, complement)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables flavin adenine dinucleotide binding	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info
enables sarcosine oxidase activity	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: pipecolic acid oxidase L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096641.1 → NP_001090110.1 pipecolic acid oxidase L homeolog

See identical proteins and their annotated locations for NP_001090110.1

Status: PROVISIONAL

Source sequence(s)

BC106466

UniProtKB/TrEMBL

A0A974HXP6, Q3KPZ3

Related

ENSXLAP00005088686.1, ENSXLAT00005090355.1

Conserved Domains (2) summary

TIGR01377
Location:9 → 391

soxA_mon; sarcosine oxidase, monomeric form

pfam13450
Location:13 → 39

NAD_binding_8; NAD(P)-binding Rossmann-like domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

33178687..33202335 complement

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GenBank, FASTA, Sequence Viewer (Graphics)