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    LOC6600108 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [ Drosophila persimilis ]

    Gene ID: 6600108, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6600108
    Gene description
    NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
    Locus tag
    Dper_GL13432
    See related
    EnsemblRapid:LOC6600108
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila persimilis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GL13432; GL13432-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6600108 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825326.1 (1850385..1851462)

    NW_020825326.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6600105 Neighboring gene solute carrier family 35 member E1 homolog Neighboring gene DISCO Interacting Protein 1 Neighboring gene tektin-3 Neighboring gene glucosidase 2 subunit alpha

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020825326 Unplaced Scaffold Reference DperRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in iron-sulfur cluster assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
    Names
    Dper\GL13432
    Dper\GL13432-PA
    dper_GLEANR_13846

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DperRS2

    Genomic

    1. NW_020825326.1 Reference DperRS2

      Range
      1850385..1851462
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026990863.1 → XP_026846664.1  NFU1 iron-sulfur cluster scaffold homolog, mitochondrial

      UniProtKB/Swiss-Prot
      B4H303
      Related
      XP_026846664.1, XM_026990863.1
      Conserved Domains (2) summary
      pfam01106
      Location:182 → 248
      NifU; NifU-like domain
      pfam08712
      Location:69 → 156
      Nfu_N; Scaffold protein Nfu/NifU N terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B4H303.1 GenPept UniProtKB/Swiss-Prot:B4H303

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