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    PVX_084195 origin recognition complex 1 protein, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

    Gene ID: 5475814, updated on 5-Sep-2024

    Summary

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    Gene symbol
    PVX_084195
    Gene description
    origin recognition complex 1 protein, putative
    Locus tag
    PVX_084195
    See related
    PlasmoDB:PVX_084195; VEuPathDB:PVX_084195
    Gene type
    protein coding
    RNA name
    origin recognition complex 1 protein, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium vivax (strain: Salvador I)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
    Orthologs
    Plasmodium falciparum all
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    Genomic context

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    See PVX_084195 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    1
    Sequence:
    Chromosome: 13; NC_009918.1 (89530..93018)

    Chromosome 13 - NC_009918.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein, conserved Neighboring gene high mobility group protein, putative Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein, conserved

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009918.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Repeated regions

    • Loc: 90221-90248 rpt_type = tandem , rpt_unit_seq = t , satellite = microsatellite
    • Loc: 91532-91554 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite
    • Loc: 91633-91657 rpt_type = tandem , rpt_unit_seq = t , satellite = microsatellite
    • Loc: 91939-92071 rpt_type = tandem , rpt_unit_seq = cat , satellite = microsatellite
    • Loc: 92078-92113 rpt_type = tandem , rpt_unit_seq = t , satellite = microsatellite
    • Loc: 92399-92423 rpt_type = tandem , rpt_unit_seq = t , satellite = microsatellite
    • Loc: 92698-92725 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA replication origin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic DNA replication checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nuclear origin of replication recognition complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    origin recognition complex 1 protein, putative
    XP_001616506.1
    • encoded by transcript PVX_084195A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009918.1 Reference assembly

      Range
      89530..93018
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001616456.1 → XP_001616506.1  origin recognition complex 1 protein, putative [Plasmodium vivax]

      See identical proteins and their annotated locations for XP_001616506.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0J9SLH4, A0A0J9TQY7, A0A0J9VTX1, A0A1G4H2T4, A5K0D2
      Conserved Domains (2) summary
      PTZ00112
      Location:1 → 1162
      PTZ00112; origin recognition complex 1 protein; Provisional
      pfam00004
      Location:782 → 928
      AAA; ATPase family associated with various cellular activities (AAA)
    Nucleotide Protein
    Heading Accession and Version

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