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    Ccdc32 coiled-coil domain containing 32 [ Mus musculus (house mouse) ]

    Gene ID: 269336, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ccdc32provided by MGI
    Official Full Name
    coiled-coil domain containing 32provided by MGI
    Primary source
    MGI:MGI:2685477
    See related
    Ensembl:ENSMUSG00000039983 AllianceGenome:MGI:2685477
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm631
    Summary
    Involved in cilium organization. Predicted to be located in clathrin-coated pit. Orthologous to human CCDC32 (coiled-coil domain containing 32). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in frontal lobe adult (RPKM 9.8), cortex adult (RPKM 9.4) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ccdc32 in Genome Data Viewer
    Location:
    2 E5; 2 59.82 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (118848260..118859887, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (119017779..119029406, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene 14089 Neighboring gene ubiquinol-cytochrome c reductase hinge protein, pseudogene 2 Neighboring gene STARR-positive B cell enhancer ABC_E4492 Neighboring gene STARR-positive B cell enhancer ABC_E146 Neighboring gene STARR-positive B cell enhancer ABC_E1595 Neighboring gene RNA pseudouridylate synthase domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E1596 Neighboring gene nuclear encoded tRNA serine 7 (anticodon GCT)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    General gene information

    Clone Names

    • MGC60849

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in cilium organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cilium organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in head development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of clathrin-dependent endocytosis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of clathrin-dependent endocytosis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in clathrin-coated pit ISO
    Inferred from Sequence Orthology
    more info
     
    located_in clathrin-coated pit ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 32
    Names
    uncharacterized protein C15orf57 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199310.2NP_955014.2  coiled-coil domain-containing protein 32

      See identical proteins and their annotated locations for NP_955014.2

      Status: VALIDATED

      Source sequence(s)
      AK132604, AK147152, BY086759, BY262121
      Consensus CDS
      CCDS50671.1
      UniProtKB/Swiss-Prot
      Q5U667, Q7TPZ0, Q8BS39
      UniProtKB/TrEMBL
      Q3UHY7
      Related
      ENSMUSP00000038589.8, ENSMUST00000036470.14
      Conserved Domains (1) summary
      pfam14989
      Location:18164
      CCDC32; Coiled-coil domain containing 32

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      118848260..118859887 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011239574.1XP_011237876.1  coiled-coil domain-containing protein 32 isoform X1

      See identical proteins and their annotated locations for XP_011237876.1

      UniProtKB/Swiss-Prot
      Q5U667, Q7TPZ0, Q8BS39
      UniProtKB/TrEMBL
      Q3UHY7
      Conserved Domains (1) summary
      pfam14989
      Location:18164
      CCDC32; Coiled-coil domain containing 32