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    RHBDL3 rhomboid like 3 [ Ovis aries (sheep) ]

    Gene ID: 101115635, updated on 8-Mar-2024

    Summary

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    Gene symbol
    RHBDL3
    Gene description
    rhomboid like 3
    See related
    EnsemblRapid:ENSOARG00020012523
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    See RHBDL3 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 11 NC_056064.1 (17577217..17633096, complement)

    Chromosome 11 - NC_056064.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 207 Neighboring gene chromosome 11 C17orf75 homolog Neighboring gene ras homolog family member T1 Neighboring gene ring finger protein 135

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056064.1 Chromosome 11 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Ovis aries Rambouillet Genome sequencing and assembly
    • BioProject: PRJNA414087
    • Analysis date: Thu Jan 09 10:41:41 2025

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rhomboid-related protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056064.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      17577217..17633096 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015098507.4 → XP_014953993.2  rhomboid-related protein 3 isoform X2

      UniProtKB/TrEMBL
      W5PMQ0
      Related
      ENSOARP00020035190.1, ENSOART00020042181.1

    2. XM_060395233.1 → XP_060251216.1  rhomboid-related protein 3 isoform X3

      Related
      ENSOARP00020016231.2, ENSOART00020019603.2

    3. XM_027975282.3 → XP_027831083.1  rhomboid-related protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A6P7EIY5, W5PMQ0
      Related
      ENSOARP00020016125.1, ENSOART00020019488.2
      Conserved Domains (2) summary
      pfam01694
      Location:203 → 357
      Rhomboid; Rhomboid family
      pfam13499
      Location:35 → 98
      EF-hand_7; EF-hand domain pair
    Nucleotide Protein Strain
    Heading Accession and Version

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