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    PLEKHF2 pleckstrin homology and FYVE domain containing 2 [ Eumetopias jubatus (Steller sea lion) ]

    Gene ID: 114214206, updated on 15-Mar-2024

    Summary

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    Gene symbol
    PLEKHF2
    Gene description
    pleckstrin homology and FYVE domain containing 2
    See related
    EnsemblRapid:ENSEJUG00000006502
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Eumetopias jubatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias
    Orthologs
    human mouse all
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    Genomic context

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    See PLEKHF2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current ASM402803v1 (GCF_004028035.1) Unplaced Scaffold NW_020998609.1 (10961358..10990346)

    NW_020998609.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein 25-like Neighboring gene uncharacterized LOC114216125 Neighboring gene uncharacterized LOC114216123 Neighboring gene uncharacterized LOC114215036 Neighboring gene tumor protein p53 inducible nuclear protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020998609 Unplaced Scaffold Reference ASM402803v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pleckstrin homology domain-containing family F member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Eumetopias jubatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM402803v1 Primary Assembly

    Genomic

    1. NW_020998609.1 Reference ASM402803v1 Primary Assembly

      Range
      10961358..10990346
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028109738.1 → XP_027965539.1  pleckstrin homology domain-containing family F member 2

      Conserved Domains (2) summary
      cd01218
      Location:7 → 129
      PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
      cd15755
      Location:148 → 211
      FYVE_PKHF2; FYVE domain found in protein containing both PH and FYVE domains 2 (phafin-2) and similar proteins

    2. XM_028109731.1 → XP_027965532.1  pleckstrin homology domain-containing family F member 2

      Conserved Domains (2) summary
      cd01218
      Location:7 → 129
      PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
      cd15755
      Location:148 → 211
      FYVE_PKHF2; FYVE domain found in protein containing both PH and FYVE domains 2 (phafin-2) and similar proteins

    3. XM_028109751.1 → XP_027965552.1  pleckstrin homology domain-containing family F member 2

      Conserved Domains (2) summary
      cd01218
      Location:7 → 129
      PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
      cd15755
      Location:148 → 211
      FYVE_PKHF2; FYVE domain found in protein containing both PH and FYVE domains 2 (phafin-2) and similar proteins

    4. XM_028109723.1 → XP_027965524.1  pleckstrin homology domain-containing family F member 2

      Conserved Domains (2) summary
      cd01218
      Location:7 → 129
      PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
      cd15755
      Location:148 → 211
      FYVE_PKHF2; FYVE domain found in protein containing both PH and FYVE domains 2 (phafin-2) and similar proteins

    5. XM_028109716.1 → XP_027965517.1  pleckstrin homology domain-containing family F member 2

      Conserved Domains (2) summary
      cd01218
      Location:7 → 129
      PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
      cd15755
      Location:148 → 211
      FYVE_PKHF2; FYVE domain found in protein containing both PH and FYVE domains 2 (phafin-2) and similar proteins

    6. XM_028109746.1 → XP_027965547.1  pleckstrin homology domain-containing family F member 2

      Related
      ENSEJUP00000008511.1, ENSEJUT00000009625.1
      Conserved Domains (2) summary
      cd01218
      Location:7 → 129
      PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain
      cd15755
      Location:148 → 211
      FYVE_PKHF2; FYVE domain found in protein containing both PH and FYVE domains 2 (phafin-2) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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