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    LOC114450492 ras-related protein Rab-3A-like [ Parambassis ranga (Indian glassy fish) ]

    Gene ID: 114450492, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC114450492
    Gene description
    ras-related protein Rab-3A-like
    See related
    Ensembl:ENSPRNG00000022996
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parambassis ranga
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Ambassidae; Parambassis
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    Genomic context

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    See LOC114450492 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current fParRan2.1 (GCF_900634625.1) 17 NC_041037.1 (13988720..13995014)

    Chromosome 17 - NC_041037.1Genomic Context describing neighboring genes Neighboring gene IFI30 lysosomal thiol reductase a Neighboring gene phosphodiesterase 4C, cAMP-specific a Neighboring gene transcription factor jun-D-like Neighboring gene pyroglutamyl-peptidase 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041037.1 Chromosome 17 Reference fParRan2.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axonogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in maintenance of presynaptic active zone structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of synaptic vesicle fusion to presynaptic active zone membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle docking involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-3A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parambassis ranga Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fParRan2.1

    Genomic

    1. NC_041037.1 Reference fParRan2.1

      Range
      13988720..13995014
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028428645.1 → XP_028284446.1  ras-related protein Rab-3A-like

      UniProtKB/TrEMBL
      A0A6P7KAD4
      Related
      ENSPRNP00000047957.1, ENSPRNT00000050675.1
      Conserved Domains (1) summary
      cd01865
      Location:21 → 185
      Rab3; Rab GTPase family 3 contains Rab3A, Rab3B, Rab3C and Rab3D
    Nucleotide Protein
    Heading Accession and Version

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