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    selenof selenoprotein F [ Parambassis ranga (Indian glassy fish) ]

    Gene ID: 114450498, updated on 15-Mar-2024

    Summary

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    Gene symbol
    selenof
    Gene description
    selenoprotein F
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parambassis ranga
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Ambassidae; Parambassis
    Orthologs
    human zebrafish all
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    Genomic context

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    See selenof in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current fParRan2.1 (GCF_900634625.1) 17 NC_041037.1 (13293201..13298544, complement)

    Chromosome 17 - NC_041037.1Genomic Context describing neighboring genes Neighboring gene transcription factor Sox-14-like Neighboring gene claudin 18 Neighboring gene heparan sulfate 2-O-sulfotransferase 1a Neighboring gene protein kinase N2a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041037.1 Chromosome 17 Reference fParRan2.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum lumen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    selenoprotein F

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parambassis ranga Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fParRan2.1

    Genomic

    1. NC_041037.1 Reference fParRan2.1

      Range
      13293201..13298544 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028428652.1 → XP_028284453.1  selenoprotein F

      UniProtKB/TrEMBL
      A0A6P7K4Z5
      Conserved Domains (1) summary
      pfam08806
      Location:76 → 150
      Sep15_SelM; Sep15/SelM redox domain
    Nucleotide Protein
    Heading Accession and Version

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