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    rps15 ribosomal protein S15 [ Parambassis ranga (Indian glassy fish) ]

    Gene ID: 114450499, updated on 15-Mar-2024

    Summary

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    Gene symbol
    rps15
    Gene description
    ribosomal protein S15
    See related
    Ensembl:ENSPRNG00000022897
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parambassis ranga
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Ambassidae; Parambassis
    Orthologs
    human zebrafish all
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    Genomic context

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    See rps15 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current fParRan2.1 (GCF_900634625.1) 17 NC_041037.1 (13843418..13845600, complement)

    Chromosome 17 - NC_041037.1Genomic Context describing neighboring genes Neighboring gene angiopoietin-like 4 Neighboring gene dipeptidyl peptidase 9 Neighboring gene calponin 2 Neighboring gene cofactor required for Sp1 transcriptional activation, subunit 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041037.1 Chromosome 17 Reference fParRan2.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ribosomal small subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parambassis ranga Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fParRan2.1

    Genomic

    1. NC_041037.1 Reference fParRan2.1

      Range
      13843418..13845600 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028428653.1 → XP_028284454.1  40S ribosomal protein S15

      UniProtKB/TrEMBL
      A0A6P7K580
      Related
      ENSPRNP00000047715.1, ENSPRNT00000050430.1
      Conserved Domains (1) summary
      PTZ00096
      Location:1 → 143
      PTZ00096; 40S ribosomal protein S15; Provisional
    Nucleotide Protein
    Heading Accession and Version

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