U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    tnpB IS66 family insertion sequence element accessory protein TnpB [ Vibrio crassostreae ]

    Gene ID: 93903681, updated on 14-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    tnpB
    Gene description
    IS66 family insertion sequence element accessory protein TnpB
    Locus tag
    OC193_RS26005
    Gene type
    protein coding
    Organism
    Vibrio crassostreae (strain: LMG 22240, culture-collection: BCCM/LMG:22240, type-material: type strain of Vibrio crassostreae)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    plasmid: p2

    NZ_AP025479.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene IS66 family transposase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_AP025479.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Structural and functional characterization of IS679 and IS66-family elements. Han CG, et al. J Bacteriol, 2001 Jul. PMID 11418571, Free PMC Article
    2. Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach. Jiang C, et al. Curr Microbiol, 2021 Dec 14. PMID 34905112

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    IS66 family insertion sequence element accessory protein TnpB
    WP_132714720.1
    • TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase.

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP025479.1 Reference assembly

      Range
      142877..143119 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_132714720.1 MULTISPECIES: IS66 family insertion sequence element accessory protein TnpB [Vibrio]

      UniProtKB/TrEMBL
      A0A822MM62, A0AA43K4Q0
    Nucleotide Protein
    Heading Accession and Version