U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    rno PHD finger protein rhinoceros [ Drosophila navojoa ]

    Gene ID: 108651301, updated on 12-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    rno
    Gene description
    PHD finger protein rhinoceros
    Locus tag
    AWZ03_000208
    See related
    EnsemblRapid:LOC108651301
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila navojoa
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See rno in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current UFRJ_Dnav_4.2 (GCF_001654015.2) Unplaced Scaffold NW_022045860.1 (2214791..2227296, complement)
    100 previous assembly ASM165401v1 (GCF_001654015.1) 4 Unlocalized Scaffold NW_017181430.1 (566066..577482)

    NW_022045860.1Genomic Context describing neighboring genes Neighboring gene tryptophan 5-hydroxylase 1 Neighboring gene JNK-interacting protein Aplip1 Neighboring gene nitrilase and fragile histidine triad fusion protein NitFhit Neighboring gene BTB/POZ domain-containing protein mrityu Neighboring gene Glycerol kinase 1 Neighboring gene Pre-mRNA processing factor 4 kinase

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    PHD finger protein rhinoceros

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Drosophila navojoa Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UFRJ_Dnav_4.2

    Genomic

    1. NW_022045860.1 Reference UFRJ_Dnav_4.2

      Range
      2214791..2227296 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030391266.1 → XP_030247126.1  PHD finger protein rhinoceros isoform X1

      UniProtKB/TrEMBL
      A0A484BXG6
      Related
      XP_030247126.1, XM_030391266.1
      Conserved Domains (3) summary
      COG5141
      Location:248 → 660
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      cd15707
      Location:365 → 478
      ePHD_RNO; Extended PHD finger found in Drosophila melanogaster PHD finger protein rhinoceros (RNO) and similar proteins
      pfam15090
      Location:1598 → 1701
      DUF4553; Domain of unknown function (DUF4553)

    2. XM_030382059.1 → XP_030237919.1  PHD finger protein rhinoceros isoform X2

      Related
      XP_030237919.1, XM_030382059.1
      Conserved Domains (3) summary
      COG5141
      Location:248 → 660
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      cd15707
      Location:365 → 478
      ePHD_RNO; Extended PHD finger found in Drosophila melanogaster PHD finger protein rhinoceros (RNO) and similar proteins
      pfam15090
      Location:1184 → 1287
      DUF4553; Domain of unknown function (DUF4553)

    3. XM_018100880.2 → XP_017956369.1  PHD finger protein rhinoceros isoform X1

      UniProtKB/TrEMBL
      A0A484BXG6
      Related
      XP_017956369.1, XM_018100880.2
      Conserved Domains (3) summary
      COG5141
      Location:248 → 660
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      cd15707
      Location:365 → 478
      ePHD_RNO; Extended PHD finger found in Drosophila melanogaster PHD finger protein rhinoceros (RNO) and similar proteins
      pfam15090
      Location:1598 → 1701
      DUF4553; Domain of unknown function (DUF4553)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases