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    argK methylmalonyl-CoA mutase-interacting GTPase YgfD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947412, updated on 3-Dec-2024

    Summary

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    Official Symbol
    argK
    Official Full Name
    methylmalonyl-CoA mutase-interacting GTPase YgfD
    Primary source
    ECOCYC:EG11445
    Locus tag
    b2918
    See related
    ASAP:ABE-0009579
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2914; ygfD
    Summary
    The role of ArgK in arginine transport needs to be reexamined. [More information is available at EcoGene: EG11445]. YgfD is a member of the G3E family of P-loop GTPases . [More information is available at EcoCyc: EG11445].
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    Genomic context

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    Sequence:
    NC_000913.3 (3062987..3063982)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene DNA-binding transcriptional dual regulator ArgP Neighboring gene methylmalonyl-CoA mutase Neighboring gene methylmalonyl-CoA decarboxylase Neighboring gene propionyl-CoA:succinate CoA transferase Neighboring gene putative DNA-binding transcriptional regulator YgfI

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phosphorylation of the periplasmic binding protein in two transport systems for arginine incorporation in Escherichia coli K-12 is unrelated to the function of the transport system. Celis RT, et al. J Bacteriol, 1998 Sep. PMID 9733684, Free PMC Article
    2. Phosphorylation in vivo and in vitro of the arginine-ornithine periplasmic transport protein of Escherichia coli. Celis RT. Eur J Biochem, 1984 Dec 3. PMID 6389134
    3. Sleeping beauty mutase (sbm) is expressed and interacts with ygfd in Escherichia coli. Froese DS, et al. Microbiol Res, 2009. PMID 18950999, Free PMC Article
    4. MeaB is a component of the methylmalonyl-CoA mutase complex required for protection of the enzyme from inactivation. Korotkova N, et al. J Biol Chem, 2004 Apr 2. PMID 14734568
    5. Physical map location of the new Escherichia coli gene sbm. Roy I, et al. J Bacteriol, 1992 Sep. PMID 1355087, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Sbm is expressed and interacts with ygfD in Escherichia coli.
      Title: Sleeping beauty mutase (sbm) is expressed and interacts with ygfd in Escherichia coli.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTPase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables membrane scission GTPase motor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    methylmalonyl-CoA mutase-interacting GTPase YgfD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3062987..3063982
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417393.1 methylmalonyl-CoA mutase-interacting GTPase YgfD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417393.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T5YBQ1
      Conserved Domains (1) summary
      PRK09435
      Location:1 → 330
      PRK09435; methylmalonyl Co-A mutase-associated GTPase MeaB
    Nucleotide Protein
    Heading Accession and Version

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