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    rap1gap2a RAP1 GTPase activating protein 2a [ Denticeps clupeoides (denticle herring) ]

    Gene ID: 114769779, updated on 15-Mar-2024

    Summary

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    Gene symbol
    rap1gap2a
    Gene description
    RAP1 GTPase activating protein 2a
    See related
    Ensembl:ENSDCDG00000022812
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Denticeps clupeoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Denticipitoidei; Denticipitidae; Denticeps
    Also known as
    rap1gap2
    Orthologs
    zebrafish all
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    Genomic context

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    See rap1gap2a in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    100 current fDenClu1.1 (GCF_900700375.1) 19 NC_041725.1 (12847839..12902620)

    Chromosome 19 - NC_041725.1Genomic Context describing neighboring genes Neighboring gene tektin 1 Neighboring gene XIAP associated factor 1 Neighboring gene uncharacterized LOC114769781 Neighboring gene bleomycin hydrolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041725.1 Chromosome 19 Reference fDenClu1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of small GTPase mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rap1 GTPase-activating protein 2
    Names
    RAP1 GTPase activating protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Denticeps clupeoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fDenClu1.1

    Genomic

    1. NC_041725.1 Reference fDenClu1.1

      Range
      12847839..12902620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028963120.1 → XP_028818953.1  rap1 GTPase-activating protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8C4BAM1, A0A8C4G0M6
      Related
      ENSDCDP00000036097.1, ENSDCDT00000045981.1
      Conserved Domains (1) summary
      pfam02145
      Location:279 → 458
      Rap_GAP; Rap/ran-GAP

    2. XM_028963119.1 → XP_028818952.1  rap1 GTPase-activating protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C4BGV9, A0A8C4G0M6
      Related
      ENSDCDP00000036114.1, ENSDCDT00000045998.1
      Conserved Domains (1) summary
      pfam02145
      Location:280 → 459
      Rap_GAP; Rap/ran-GAP

    3. XM_028963117.1 → XP_028818950.1  rap1 GTPase-activating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C4BG10, A0A8C4G0M6
      Related
      ENSDCDP00000036119.1, ENSDCDT00000046003.1
      Conserved Domains (1) summary
      pfam02145
      Location:297 → 476
      Rap_GAP; Rap/ran-GAP

    4. XM_028963118.1 → XP_028818951.1  rap1 GTPase-activating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C4G0M6
      Related
      ENSDCDP00000036129.1, ENSDCDT00000046013.1
      Conserved Domains (1) summary
      pfam02145
      Location:282 → 461
      Rap_GAP; Rap/ran-GAP

    5. XM_028963126.1 → XP_028818959.1  rap1 GTPase-activating protein 2 isoform X7

      UniProtKB/TrEMBL
      A0A8C4G0P1
      Conserved Domains (1) summary
      pfam02145
      Location:282 → 461
      Rap_GAP; Rap/ran-GAP

    6. XM_028963122.1 → XP_028818955.1  rap1 GTPase-activating protein 2 isoform X5

      UniProtKB/TrEMBL
      A0A8C4BC26
      Related
      ENSDCDP00000036112.1, ENSDCDT00000045996.1
      Conserved Domains (1) summary
      pfam02145
      Location:219 → 398
      Rap_GAP; Rap/ran-GAP

    7. XM_028963124.1 → XP_028818957.1  rap1 GTPase-activating protein 2 isoform X6

      UniProtKB/TrEMBL
      A0A8C4G0M6
      Conserved Domains (1) summary
      pfam02145
      Location:204 → 383
      Rap_GAP; Rap/ran-GAP

    8. XM_028963123.1 → XP_028818956.1  rap1 GTPase-activating protein 2 isoform X5

      UniProtKB/TrEMBL
      A0A8C4BC26
      Conserved Domains (1) summary
      pfam02145
      Location:219 → 398
      Rap_GAP; Rap/ran-GAP

    9. XM_028963125.1 → XP_028818958.1  rap1 GTPase-activating protein 2 isoform X6

      UniProtKB/TrEMBL
      A0A8C4G0M6
      Conserved Domains (1) summary
      pfam02145
      Location:204 → 383
      Rap_GAP; Rap/ran-GAP
    Nucleotide Protein
    Heading Accession and Version

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