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    LOC118033925 ABC transporter F family member 3 [ Populus alba (white poplar) ]

    Gene ID: 118033925, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC118033925
    Gene description
    ABC transporter F family member 3
    Locus tag
    D5086_0000212840
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus alba
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC118033925 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current ASM523922v1 (GCF_005239225.1) Unplaced Scaffold NW_023272025.1 (2159191..2165427)

    NW_023272025.1Genomic Context describing neighboring genes Neighboring gene luminal-binding protein 5-like Neighboring gene glutamine-dependent NAD(+) synthetase-like Neighboring gene uncharacterized LOC118033926 Neighboring gene probable trehalase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023272025 Unplaced Scaffold Reference ASM523922v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ABC transporter F family member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus alba Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM523922v1 Primary Assembly

    Genomic

    1. NW_023272025.1 Reference ASM523922v1 Primary Assembly

      Range
      2159191..2165427
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035039063.1 → XP_034894954.1  ABC transporter F family member 3

      UniProtKB/TrEMBL
      A0A4U5PL74
      Conserved Domains (1) summary
      PLN03073
      Location:1 → 715
      PLN03073; ABC transporter F family; Provisional
    Nucleotide Protein
    Heading Accession and Version

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