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    Slc10a2 solute carrier family 10 member 2 [ Mus pahari (shrew mouse) ]

    Gene ID: 110337009, updated on 15-Mar-2024

    Summary

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    Gene symbol
    Slc10a2
    Gene description
    solute carrier family 10 member 2
    See related
    Ensembl:MGP_PahariEiJ_G0021265
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus pahari
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
    Orthologs
    human mouse all
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    Genomic context

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    See Slc10a2 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 19 NC_034608.1 (24131425..24148645, complement)

    Chromosome 19 - NC_034608.1Genomic Context describing neighboring genes Neighboring gene SHC binding and spindle associated 1 Neighboring gene ezrin pseudogene Neighboring gene 60S ribosomal protein L7-like 1 pseudogene Neighboring gene small nucleolar RNA SNORA48

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_034608.1 Chromosome 19 Reference PAHARI_EIJ_v1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables bile acid:sodium symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bile acid and bile salt transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ileal sodium/bile acid cotransporter

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PAHARI_EIJ_v1.1

    Genomic

    1. NC_034608.1 Reference PAHARI_EIJ_v1.1

      Range
      24131425..24148645 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021219754.2 → XP_021075413.2  ileal sodium/bile acid cotransporter isoform X1

      Related
      MGP_PahariEiJ_P0046573, MGP_PahariEiJ_T0046573.1
      Conserved Domains (1) summary
      TIGR00841
      Location:68 → 351
      bass; bile acid transporter

    2. XM_029532013.1 → XP_029387873.1  ileal sodium/bile acid cotransporter isoform X2

      Conserved Domains (1) summary
      TIGR00841
      Location:68 → 351
      bass; bile acid transporter
    Nucleotide Protein
    Heading Accession and Version

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