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    LOC115195000 5-hydroxytryptamine receptor 2C-like [ Salmo trutta (river trout) ]

    Gene ID: 115195000, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC115195000
    Gene description
    5-hydroxytryptamine receptor 2C-like
    See related
    Ensembl:ENSSTUG00000002127
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salmo trutta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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    Genomic context

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    See LOC115195000 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current fSalTru1.1 (GCF_901001165.1) 5 NC_042961.1 (58808501..59053524, complement)

    Chromosome 5 - NC_042961.1Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptor 12-like Neighboring gene wiskott-Aldrich syndrome protein family member 3-like Neighboring gene GATA zinc finger domain-containing protein 14-like Neighboring gene tumor necrosis factor ligand superfamily member 10-like Neighboring gene uncharacterized LOC115194659 Neighboring gene uncharacterized LOC115194660

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_042961.1 Chromosome 5 Reference fSalTru1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled serotonin receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables neurotransmitter receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5-hydroxytryptamine receptor 2C-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSalTru1.1 Primary Assembly

    Genomic

    1. NC_042961.1 Reference fSalTru1.1 Primary Assembly

      Range
      58808501..59053524 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029754900.1 → XP_029610760.1  5-hydroxytryptamine receptor 2C-like

      UniProtKB/TrEMBL
      A0A673W5Q0
      Related
      ENSSTUP00000004278.1, ENSSTUT00000004534.1
      Conserved Domains (1) summary
      cd15305
      Location:76 → 453
      7tmA_5-HT2C; serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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