U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LACBIDRAFT_308973 uncharacterized protein [ Laccaria bicolor S238N-H82 ]

    Gene ID: 6071499, updated on 28-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LACBIDRAFT_308973
    Gene description
    uncharacterized protein
    Locus tag
    LACBIDRAFT_308973
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Laccaria bicolor S238N-H82 (strain: S238N-H82)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LACBIDRAFT_308973 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    11

    NW_001889874.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S19 Neighboring gene peroxiredoxin Q Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_001889874.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Martin F, et al. Nature, 2008 Mar 6. PMID 18322534
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nitronate monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001889874.1 Reference assembly

      Range
      1935405..1936976
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001875747.1 → XP_001875782.1  uncharacterized protein LACBIDRAFT_308973 [Laccaria bicolor S238N-H82]

      See identical proteins and their annotated locations for XP_001875782.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B0CV81
      Conserved Domains (2) summary
      COG2070
      Location:1 → 323
      YrpB; NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family [General function prediction only]
      cd04730
      Location:12 → 239
      NPD_like; 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin oxidoreductase ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials