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    LACBIDRAFT_318973 uncharacterized protein [ Laccaria bicolor S238N-H82 ]

    Gene ID: 6075427, updated on 28-Dec-2023

    Summary

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    Gene symbol
    LACBIDRAFT_318973
    Gene description
    uncharacterized protein
    Locus tag
    LACBIDRAFT_318973
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Laccaria bicolor S238N-H82 (strain: S238N-H82)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria
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    Genomic context

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    See LACBIDRAFT_318973 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    4

    NW_001889880.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene cytosine-purine permease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001889880.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Martin F, et al. Nature, 2008 Mar 6. PMID 18322534
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-flap endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables crossover junction DNA endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001889880.1 Reference assembly

      Range
      946914..949626 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001879978.1 → XP_001880013.1  uncharacterized protein LACBIDRAFT_318973 [Laccaria bicolor S238N-H82]

      See identical proteins and their annotated locations for XP_001880013.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B0D7K3
      Conserved Domains (2) summary
      cd09906
      Location:203 → 307
      H3TH_YEN1; H3TH domain of Yeast Endonuclease 1, a structure-specific, divalent-metal-ion dependent, 5' nuclease
      cd09870
      Location:1 → 203
      PIN_YEN1; PIN domain of Yeast Endonuclease 1, a structure-specific, divalent-metal-ion dependent, 5' nuclease and fungal homologs
    Nucleotide Protein
    Heading Accession and Version

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