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    LOC115410363 transmembrane protein 100-like [ Sphaeramia orbicularis (orbiculate cardinalfish) ]

    Gene ID: 115410363, updated on 17-Mar-2024

    Summary

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    Gene symbol
    LOC115410363
    Gene description
    transmembrane protein 100-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sphaeramia orbicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Kurtiformes; Apogonoidei; Apogonidae; Apogoninae; Sphaeramia
    Orthologs
    zebrafish all
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    Genomic context

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    See LOC115410363 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current fSphaOr1.1 (GCF_902148855.1) 19 NC_043975.1 (44978934..44981138, complement)

    Chromosome 19 - NC_043975.1Genomic Context describing neighboring genes Neighboring gene fatty acid synthase Neighboring gene protein TsetseEP-like Neighboring gene coiled-coil domain-containing protein 57-like Neighboring gene monocarboxylate transporter 4-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_043975.1 Chromosome 19 Reference fSphaOr1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cellular response to BMP stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein 100-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sphaeramia orbicularis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSphaOr1.1

    Genomic

    1. NC_043975.1 Reference fSphaOr1.1

      Range
      44978934..44981138 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030121985.1 → XP_029977845.1  transmembrane protein 100-like

      Conserved Domains (1) summary
      pfam16311
      Location:1 → 155
      TMEM100; Transmembrane protein 100

    2. XM_030121986.1 → XP_029977846.1  transmembrane protein 100-like

      Conserved Domains (1) summary
      pfam16311
      Location:1 → 155
      TMEM100; Transmembrane protein 100
    Nucleotide Protein
    Heading Accession and Version

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